Comparative Analysis of Bacterial Diversity and Community Structure in the Rhizosphere and Root Endosphere of Two Halophytes, <i>Salicornia europaea</i> and <i>Glaux maritima</i>, Collected from Two Brackish Lakes in Japan-Reference-Cited by-同舟云学术

Comparative Analysis of Bacterial Diversity and Community Structure in the Rhizosphere and Root Endosphere of Two Halophytes, Salicornia europaea and Glaux maritima, Collected from Two Brackish Lakes in Japan

Published:2020 Issue:3 Volume:35 Page:n/a
ISSN:1342-6311
Container-title:Microbes and Environments
language:en
Short-container-title:Microb. Environ.

Author:

Yamamoto Kosuke¹,Matsutani Minenosuke²,Shiwa Yuh¹²,Ishige Taichiro²,Sakamoto Hikaru³,Saitoh Hiromasa¹,Tsushima Seiya¹

Affiliation:

1. Department of Molecular Microbiology, Faculty of Life Sciences, Tokyo University of Agriculture

2. NODAI Genome Research Center, Tokyo University of Agriculture

3. Department of Northern Biosphere Agriculture, Faculty of Bioindustry, Tokyo University of Agriculture

Publisher

Japanese Society of Microbial Ecology

Subject

Plant Science,Soil Science,General Medicine,Ecology, Evolution, Behavior and Systematics

Link

https://www.jstage.jst.go.jp/article/jsme2/35/3/35_ME20072/_pdf

Reference53 articles.

1. Bibi, F., Jeong, J.H., Chung, E.J., Jeon, C.O., and Chung, Y.R. (2014) Labrenzia suaedae sp. nov., a marine bacterium isolated from a halophyte, and emended description of the genus Labrenzia. Int J Syst Evol Microbiol 64: 1116–1122.

2. Callahan, B.J., McMurdie, P.J., Rosen, M.J., Han, A.W., Johnson, A.J.A., and Holmes, S.P. (2016) DADA2: high-resolution sample inference from Illumina amplicon data. Nat Methods 13: 581e583.

3. Camacho-Sanchez, M., Barcia-Piedrasa, J.M., Redondo-Gómez, S., and Camacho, M. (2020) Mediterranean seasonality and the halophyte Arthrocnemum macrostachyum determine the bacterial community in salt marsh soils in Southwest Spain. Appl Soil Ecol 151: 103532.

4. D’Amico, F., Candela, M., Turroni, S., Biagi, E., Brigidi, P., Bega, A., et al. (2018) The rootstock regulates microbiome diversity in root and rhizosphere compartments of Vitis vinifera Cultivar Lambrusco. Front Microbiol 9: 2240.

5. DeSantis, T.Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E.L., Keller, K., et al. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72: 5069e5072.

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