A Mammalian enhancer trap resource for discovering and manipulating neuronal cell types

Author:

Shima Yasuyuki1,Sugino Ken2,Hempel Chris Martin1,Shima Masami1,Taneja Praveen1,Bullis James B1,Mehta Sonam1,Lois Carlos3,Nelson Sacha B1ORCID

Affiliation:

1. Department of Biology and National Center for Behavioral Genomics, Brandeis University, Waltham, United States

2. Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, United States

3. Division of Biology and Biological Engineering, Beckman Institute, California Institute of Technology, Pasadena, United States

Abstract

There is a continuing need for driver strains to enable cell-type-specific manipulation in the nervous system. Each cell type expresses a unique set of genes, and recapitulating expression of marker genes by BAC transgenesis or knock-in has generated useful transgenic mouse lines. However, since genes are often expressed in many cell types, many of these lines have relatively broad expression patterns. We report an alternative transgenic approach capturing distal enhancers for more focused expression. We identified an enhancer trap probe often producing restricted reporter expression and developed efficient enhancer trap screening with the PiggyBac transposon. We established more than 200 lines and found many lines that label small subsets of neurons in brain substructures, including known and novel cell types. Images and other information about each line are available online (enhancertrap.bio.brandeis.edu).

Funder

National Eye Institute

National Institute of Mental Health

National Institute of Neurological Disorders and Stroke

Human Frontier Science Program

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Reference88 articles.

1. HTSeq--a Python framework to work with high-throughput sequencing data;Anders;Bioinformatics,2015

2. Enhancer trapping in zebrafish using the sleeping beauty transposon;Balciunas;BMC Genomics,2004

3. A transgene containing lacZ is expressed in primary sensory neurons in zebrafish;Bayer;Development,1992

4. P-element-mediated enhancer detection: a versatile method to study development in Drosophila;Bellen;Genes & Development,1989

5. Stage-specific regulation of murine Hsp68 gene promoter in preimplantation mouse embryos;Bevilacqua;Developmental Biology,1995

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3