RazerS 3: Faster, fully sensitive read mapping-Reference-Cited by-同舟云学术

RazerS 3: Faster, fully sensitive read mapping

Published:2012-08-24 Issue:20 Volume:28 Page:2592-2599
ISSN:1460-2059
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Weese David,Holtgrewe Manuel,Reinert Knut

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/28/20/2592/16909405/bts505.pdf

Reference22 articles.

1. Hobbes: optimized gram-based methods for efficient read alignment;Ahmadi;Nucleic Acids Res.,2011

2. Personalized copy number and segmental duplication maps using next-generation sequencing;Alkan;Nat. Genet.,2009

3. Faster approximate string matching;Baeza-Yates;Algorithmica,1999

4. ELANDv2—fast gapped read mapping for Illumina reads;Bauer,2010

5. SHRiMP2: sensitive yet practical short read mapping;David;Bioinformatics,2011

Cited by 119 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Genomic reproducibility in the bioinformatics era;Genome Biology;2024-08-09

2. SigAlign: an alignment algorithm guided by explicit similarity criteria;Nucleic Acids Research;2024-07-16

3. Nivolumab Reaches Brain Lesions in Patients with Recurrent Glioblastoma and Induces T-cell Activity and Upregulation of Checkpoint Pathways;Cancer Immunology Research;2024-06-17

4. Identification and characterization of neoantigen-reactive CD8+ T cells following checkpoint blockade therapy in a pan-cancer setting;2024-03-17

5. Towards Equitable MHC Binding Predictions: Computational Strategies to Assess and Reduce Data Bias;2024-02-02