Xpert My cobacterium tuberculosis/Rifampicin–Detected Rifampicin Resistance is a Suboptimal Surrogate for Multidrug-resistant Tuberculosis in Eastern Democratic Republic of the Congo: Diagnostic and Clinical Implications

Author:

Bisimwa Bertin C12,Nachega Jean B345,Warren Robin M6,Theron Grant6,Metcalfe John Z7,Shah Maunank8,Diacon Andreas H9,Sam-Agudu Nadia A1011,Yotebieng Marcel12,Bulabula André N H1314,Katoto Patrick D M C1516,Chirambiza Jean-Paul17,Nyota Rosette17,Birembano Freddy M17,Musafiri Eric M17,Byadunia Sifa2,Bahizire Esto181920,Kaswa Michel K21,Callens Steven22,Kashongwe Zacharie M1223

Affiliation:

1. Laboratoire de Recherche Biomédicale Professeur André Lurhuma, Université Catholique de Bukavu, Bukavu, Democratic Republic of Congo

2. Institut Supérieur des Techniques Médicales, Bukavu, Democratic Republic of Congo

3. Departments of Epidemiology, Infectious Diseases, and Microbiology, University of Pittsburgh Graduate School of Public Health, Pittsburgh, Pennsylvania, USA

4. Department of Medicine and Center for Infectious Diseases, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa

5. Departments of Epidemiology and International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA

6. Division of Science and Technology (DST) Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, South Africa

7. Division of Pulmonary and Critical Care Medicine, Zuckerberg San Francisco General Hospital and Trauma Center, University of California, San Francisco, San Francisco, California, USA

8. Division of Infectious Diseases, Johns Hopkins School of Medicine, Baltimore, Maryland, USA

9. Task Foundation and Department of Medicine, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa

10. International Research Center of Excellence, Institute of Human Virology Nigeria, Abuja, Nigeria

11. Division of Epidemiology and Prevention, Institute of Human Virology, University of Maryland School of Medicine, Baltimore, Maryland, USA

12. Department of Medicine, Albert Einstein College of Medicine, New York, New York, USA

13. Department of Pediatrics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa

14. Infection Control Africa Network, Cape Town, South Africa

15. Centre for Environment and Health, Department of Public Health and Primary Care, Laboratory of Pneumology, Katholieke Universiteit Leuven, Leuven, Belgium

16. Department of Internal Medicine, Faculty of Medicine, Université Catholique de Bukavu, Bukavu, Democratic Republic of Congo

17. National TB Program, Provincial Anti-Leprosy and TB Coordination, Bukavu, Democratic Republic of Congo

18. Center for Tropical Diseases and Global Health, Catholic University of Bukavu, Bukavu, Democratic Republic of the Congo

19. Department of Medical Microbiology, University of Nairobi, Nairobi, Kenya

20. Centre of Research in Epidemiology, Biostatistics, and Clinical Research, Université Libre de Bruxelles, Brussels, Belgium

21. National Tuberculosis Program, Ministry of Health, Kinshasa, Democratic Republic of Congo

22. Department of Internal Medicine, Ghent University Hospital, Ghent, Belgium

23. Cliniques Universitaire de Kinshasa, Université Nationale de Kinshasa, Kinshasa, Democratic Republic of Congo

Abstract

Abstract Background Rifampicin (RIF) resistance is highly correlated with isoniazid (INH) resistance and used as proxy for multidrug-resistant tuberculosis (MDR-TB). Using MTBDRplus as a comparator, we evaluated the predictive value of Xpert MTB/RIF (Xpert)–detected RIF resistance for MDR-TB in eastern Democratic Republic of the Congo (DRC). Methods We conducted a cross-sectional study involving data from new or retreatment pulmonary adult TB cases evaluated between July 2013 and December 2016. Separate, paired sputa for smear microscopy and MTBDRplus were collected. Xpert testing was performed subject to the availability of Xpert cartridges on sample remnants after microscopy. Results Among 353 patients, 193 (54.7%) were previously treated and 224 (63.5%) were MTBDRplus TB positive. Of the 224, 43 (19.2%) were RIF monoresistant, 11 (4.9%) were INH monoresistant, 53 (23.7%) had MDR-TB, and 117 (52.2%) were RIF and INH susceptible. Overall, among the 96 samples detected by MTBDRplus as RIF resistant, 53 (55.2%) had MDR-TB. Xpert testing was performed in 179 (50.7%) specimens; among these, 163 (91.1%) were TB positive and 73 (44.8%) RIF resistant. Only 45/73 (61.6%) Xpert-identified RIF-resistant isolates had concomitant MTBDRplus-detected INH resistance. Xpert had a sensitivity of 100.0% (95% CI, 92.1–100.0) for detecting RIF resistance but a positive-predictive value of only 61.6% (95% CI, 49.5–72.8) for MDR-TB. The most frequent mutations associated with RIF and INH resistance were S531L and S315T1, respectively. Conclusions In this high-risk MDR-TB study population, Xpert had low positive-predictive value for the presence of MDR-TB. Comprehensive resistance testing for both INH and RIF should be performed in this setting.

Funder

Stellenbosch University

Fogarty International Center [FIC]

African Association for Health Professions Education and Research

European Union

National Institute of Child Health and Human Development

Central and West Africa Implementation Science Alliance

Universitaire Ontwikkelingssamenwerking

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

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