Reporting of Antimicrobial Resistance from Blood Cultures, an Antibacterial Resistance Leadership Group Survey Summary: Resistance Marker Reporting Practices from Positive Blood Cultures

Author:

Simner Patricia J12,Dien Bard Jennifer3,Doern Christopher4,Kristie Johnson J5,Westblade Lars67,Yenokyan Gayane8,Patel Robin910,Hanson Kimberly E1112,

Affiliation:

1. Department of Pathology, Johns Hopkins University School of Medicine , Baltimore, Maryland , USA

2. Department of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine , Baltimore, Maryland , USA

3. Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles, Keck School of Medicine, University of Southern California , Los Angeles, California , USA

4. Department of Pathology, Virginia Commonwealth University Health System , Richmond, Virginia , USA

5. Department of Pathology, University of Maryland School of Medicine , Baltimore, Maryland , USA

6. Department of Pathology and Laboratory Medicine, Weill Cornell Medicine , New York, New York , USA

7. Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine , New York, New York , USA

8. Johns Hopkins Biostatistics Center, Johns Hopkins Bloomberg School of Public Health , Baltimore, Maryland , USA

9. Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic , Rochester, Minnesota , USA

10. Division of Public Health, Infectious Diseases and Occupational Medicine, Department of Medicine, Mayo Clinic , Rochester, Minnesota , USA

11. Department of Medicine, Infectious Diseases Division, University of Utah School of Medicine , Salt Lake City, Utah , USA

12. Department of Pathology, Clinical Microbiology Division, University of Utah Associated Regional and University Pathologists (ARUP) Laboratories , Salt Lake City, Utah , USA

Abstract

Abstract Background We assessed how laboratories use and handle reporting of results of rapid diagnostics performed on positive blood culture broths, with a focus on antimicrobial resistance (AMR) markers. Methods A survey assembled by the Antibacterial Resistance Leadership Group Diagnostics Committee was circulated from December 2020 to May 2021. The survey was sent to local hospitals, shared on the ClinMicroNet and Division C listservs, and included in a College of American Pathologists proficiency testing survey. Results Ninety-six laboratories of various sizes across the United States (95%) and outside of the United States (5%) participated. Of the laboratories that had at least 1 rapid diagnostic in place (94%), significant heterogeneity in methods used and reporting practices was found across community (52%) and academic (40%) laboratories serving hospitals of various sizes. Respondents had implemented 1 to 6 different panels/platforms for a total of 31 permutations. Methods of reporting rapid organism identification and AMR results varied from listing all targets as “detected”/“not detected” (16–22%) without interpretive guidance, to interpreting results (23–42%), or providing therapeutic guidance comments to patient-facing healthcare teams (3–17%). Conclusions Current approaches to reporting molecular AMR test results from positive blood culture vary significantly across clinical laboratories. Providing interpretative comments with therapeutic guidance alongside results reported may assist clinicians who are not well-versed in genetic mechanisms of AMR. However, this is currently not being done in all clinical laboratories. Standardized strategies for AMR gene result reporting are needed.

Funder

NIH

Johns Hopkins ICTR

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

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