Comparison of alignment software for genome-wide bisulphite sequence data-Reference-Cited by-同舟云学术

Comparison of alignment software for genome-wide bisulphite sequence data

Published:2012-02-16 Issue:10 Volume:40 Page:e79-e79
ISSN:1362-4962
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Chatterjee Aniruddha¹¹,Stockwell Peter A.¹,Rodger Euan J.¹,Morison Ian M.¹¹

Affiliation:

1. Department of Pathology, Dunedin School of Medicine, University of Otago, 270 Great King Street, Dunedin 9054, New Zealand, 2 National Research Centre for Growth and Development, 2-6 Park Ave, Grafton, Auckland 1142, New Zealand and 3 Department of Biochemistry, University of Otago, 710 Cumberland Street, Dunedin 9054, New Zealand

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/40/10/e79/25335371/gks150.pdf

Reference15 articles.

1. Advantages of next-generation sequencing versus the microarray in epigenetic research;Hurd;Brief. Funct. Genom. Proteom.,2009

2. Next-generation sequencing: from basic research to diagnostics;Voelkerding;Clin. Chem.,2009

3. BSMAP: whole genome bisulfite sequence MAPping program;Xi;BMC Bioinformatics,2009

4. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning;Cokus;Nature,2008

5. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome;Langmead;Genome Biol.,2009

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