Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera-Reference-Cited by-同舟云学术

Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera

Published:2020-05-22 Issue:7 Volume:12 Page:1099-1188
ISSN:1759-6653
Container-title:Genome Biology and Evolution
language:en
Short-container-title:

Author:

Oeyen Jan Philip¹²^ORCID,Baa-Puyoulet Patrice³,Benoit Joshua B⁴,Beukeboom Leo W⁵,Bornberg-Bauer Erich⁶,Buttstedt Anja⁷,Calevro Federica³,Cash Elizabeth I⁸⁹,Chao Hsu¹⁰,Charles Hubert³,Chen Mei-Ju May¹¹,Childers Christopher¹²,Cridge Andrew G¹³,Dearden Peter¹³,Dinh Huyen¹⁰,Doddapaneni Harsha Vardhan¹⁰,Dolan Amanda¹⁴,Donath Alexander¹^ORCID,Dowling Daniel⁶,Dugan Shannon¹⁰,Duncan Elizabeth¹⁵,Elpidina Elena N¹⁶,Friedrich Markus¹⁷,Geuverink Elzemiek⁵,Gibson Joshua D¹⁸¹⁹,Grath Sonja²⁰,Grimmelikhuijzen Cornelis J P²¹,Große-Wilde Ewald²²²³,Gudobba Cameron²⁴,Han Yi¹⁰,Hansson Bill S²²,Hauser Frank²¹,Hughes Daniel S T¹⁰,Ioannidis Panagiotis²⁵²⁶²⁷,Jacquin-Joly Emmanuelle²⁸,Jennings Emily C⁴,Jones Jeffery W²⁹,Klasberg Steffen⁶,Lee Sandra L¹⁰,Lesný Peter³⁰,Lovegrove Mackenzie¹³,Martin Sebastian³⁰,Martynov Alexander G³¹,Mayer Christoph¹,Montagné Nicolas³²,Moris Victoria C³³,Munoz-Torres Monica³⁴,Murali Shwetha Canchi¹⁰,Muzny Donna M¹⁰,Oppert Brenda³⁵,Parisot Nicolas³,Pauli Thomas³³,Peters Ralph S³⁶,Petersen Malte¹³⁷,Pick Christian³⁸,Persyn Emma³²,Podsiadlowski Lars¹,Poelchau Monica F¹²,Provataris Panagiotis¹,Qu Jiaxin¹⁰,Reijnders Maarten J M F³⁹⁴⁰,von Reumont Björn Marcus⁴¹⁴²,Rosendale Andrew J⁴,Simao Felipe A²⁵²⁶,Skelly John¹³,Sotiropoulos Alexandros G²¹,Stahl Aaron L⁴⁴³,Sumitani Megumi⁴⁴,Szuter Elise M⁸,Tidswell Olivia⁴⁵⁴⁶,Tsitlakidis Evangelos²¹,Vedder Lucia⁴⁷,Waterhouse Robert M³⁹⁴⁰^ORCID,Werren John H¹⁴,Wilbrandt Jeanne¹⁴⁸^ORCID,Worley Kim C¹⁰,Yamamoto Daisuke S⁴⁹,van de Zande Louis⁵,Zdobnov Evgeny M²⁵²⁶,Ziesmann Tanja¹,Gibbs Richard A¹⁰,Richards Stephen¹⁰,Hatakeyama Masatsugu⁵⁰^ORCID,Misof Bernhard¹,Niehuis Oliver³³

Affiliation:

1. Center for Molecular Biodiversity Research, Zoologisches Forschungsmuseum Alexander Koenig, Bonn, Germany

2. Lead Contact

3. INSA-Lyon, INRAE, BF2I, UMR0203, Université de Lyon, Villeurbanne, France

4. Department of Biological Sciences, University of Cincinnati

5. Groningen Institute for Evolutionary Life Sciences, University of Groningen, The Netherlands

6. Institute for Evolution and Biodiversity, University of Münster, Germany

7. B CUBE—Center for Molecular Bioengineering, Technische Universität Dresden, Germany

8. School of Life Sciences, College of Liberal Arts and Sciences, Arizona State University

9. Department of Environmental Science, Policy, and Management, College of Natural Resources, University of California, Berkeley

10. Human Genome Sequencing Center, Department of Human and Molecular Genetics, Baylor College of Medicine, Houston, Texas

11. Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan

12. USDA-ARS, National Agricultural Library, Beltsville, Maryland

13. Genomics Aotearoa and Biochemistry Department, University of Otago, Dunedin, New Zealand

14. Department of Biology, University of Rochester

15. School of Biology, Faculty of Biological Sciences, University of Leeds, United Kingdom

16. A.N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Russia

17. Department of Biological Sciences, Wayne State University, Detroit

18. Department of Biology, Georgia Southern University, Statesboro

19. Department of Entomology, Purdue University, West Lafayette

20. Division of Evolutionary Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, Planegg-Martinsried, Germany

21. Department of Biology, University of Copenhagen, Denmark

22. Department of Evolutionary Neuroethology, Max-Planck-Institute for Chemical Ecology, Jena, Germany

23. Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague (CULS), Praha 6—Suchdol, Czech Republic

24. Department of Psychiatry and Behavioral Neuroscience, University of Chicago

25. Department of Genetic Medicine and Development, University of Geneva Medical School, Switzerland

26. Swiss Institute of Bioinformatics, Geneva, Switzerland

27. Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology—Hellas, Heraklion, Crete, Greece

28. INRAE, CNRS, IRD, UPEC, Univ. P7, Institute of Ecology and Environmental Sciences of Paris, Sorbonne Université, Versailles, France

29. Department of Biological Sciences, Oakland University, Rochester

30. Institute of Evolutionary Biology and Ecology, Zoology and Evolutionary Biology, University of Bonn, Germany

31. Center of Life Sciences, Skolkovo Institute of Science and Technology, Russia

32. INRAE, CNRS, IRD, UPEC, Univ. P7, Institute of Ecology and Environmental Sciences of Paris, Sorbonne Université, Paris, France

33. Department of Evolutionary Biology and Ecology, Institute of Biology I (Zoology), Albert Ludwig University Freiburg, Germany

34. Berkeley Bioinformatics Open-source Projects (BBOP), Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California

35. USDA Agricultural Research Service, Center for Grain and Animal Health Research, Manhattan, Kansas

36. Arthropoda Department, Center for Taxonomy and Evolutionary Research, Zoologisches Forschungsmuseum Alexander Koenig, Bonn, Germany

37. Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany

38. Zoological Institute, University of Hamburg, Germany

39. Department of Ecology and Evolution, University of Lausanne, Switzerland

40. Swiss Institute of Bioinformatics, Lausanne, Switzerland

41. Institute for Insect Biotechnology, University of Gießen, Germany

42. Center for Translational Biodiversity Genomics (LOEWE-TBG), Frankfurt, Germany

43. Department of Neuroscience, The Scripps Research Institute, Jupiter, Florida

44. Transgenic Silkworm Research Unit, Division of Biotechnology, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO), Owashi, Tsukuba, Japan

45. Biochemistry Department, University of Otago, Dunedin, New Zealand

46. Zoology Department, University of Cambridge, United Kingdom

47. Center for Bioinformatics Tübingen (ZBIT), University of Tübingen, Germany

48. Computational Biology Group, Leibniz Institute on Aging—Fritz Lipmann Institute, Jena, Germany

49. Division of Medical Zoology, Department of Infection and Immunity, Jichi Medical University, Yakushiji, Shimotsuke, Japan

50. Insect Genome Research and Engineering Unit, Division of Applied Genetics, Institute of Agrobiological Sciences, NARO, Owashi, Tsukuba, Japan

Abstract

Abstract The tremendous diversity of Hymenoptera is commonly attributed to the evolution of parasitoidism in the last common ancestor of parasitoid sawflies (Orussidae) and wasp-waisted Hymenoptera (Apocrita). However, Apocrita and Orussidae differ dramatically in their species richness, indicating that the diversification of Apocrita was promoted by additional traits. These traits have remained elusive due to a paucity of sawfly genome sequences, in particular those of parasitoid sawflies. Here, we present comparative analyses of draft genomes of the primarily phytophagous sawfly Athalia rosae and the parasitoid sawfly Orussus abietinus. Our analyses revealed that the ancestral hymenopteran genome exhibited traits that were previously considered unique to eusocial Apocrita (e.g., low transposable element content and activity) and a wider gene repertoire than previously thought (e.g., genes for CO2 detection). Moreover, we discovered that Apocrita evolved a significantly larger array of odorant receptors than sawflies, which could be relevant to the remarkable diversification of Apocrita by enabling efficient detection and reliable identification of hosts.

Funder

Det Frie Forskningsråd

Publisher

Oxford University Press (OUP)

Subject

Genetics,Ecology, Evolution, Behavior and Systematics

Link

http://academic.oup.com/gbe/advance-article-pdf/doi/10.1093/gbe/evaa106/33284559/evaa106.pdf

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