Evolution of five environmentally responsive gene families in a pine‐feeding sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae)

Author:

Vertacnik Kim L.1ORCID,Herrig Danielle K.2ORCID,Godfrey R. Keating3ORCID,Hill Tom4ORCID,Geib Scott M.5ORCID,Unckless Robert L.6ORCID,Nelson David R.7ORCID,Linnen Catherine R.2ORCID

Affiliation:

1. Department of Entomology University of Kentucky Lexington Kentucky USA

2. Department of Biology University of Kentucky Lexington Kentucky USA

3. McGuire Center for Lepidoptera and Biodiversity, University of Florida Gainesville Florida USA

4. National Institute of Allergy and Infectious Diseases Bethesda Maryland USA

5. Tropical Crop and Commodity Protection Research Unit United States Department of Agriculture: Agriculture Research Service Pacific Basin Agricultural Research Center Hilo Hawaii USA

6. Department of Molecular Biosciences University of Kansas Lawrence Kansas USA

7. Department of Microbiology, Immunology and Biochemistry University of Tennessee Health Science Center Memphis Tennessee USA

Abstract

AbstractA central goal in evolutionary biology is to determine the predictability of adaptive genetic changes. Despite many documented cases of convergent evolution at individual loci, little is known about the repeatability of gene family expansions and contractions. To address this void, we examined gene family evolution in the redheaded pine sawfly Neodiprion lecontei, a noneusocial hymenopteran and exemplar of a pine‐specialized lineage evolved from angiosperm‐feeding ancestors. After assembling and annotating a draft genome, we manually annotated multiple gene families with chemosensory, detoxification, or immunity functions before characterizing their genomic distributions and molecular evolution. We find evidence of recent expansions of bitter gustatory receptor, clan 3 cytochrome P450, olfactory receptor, and antimicrobial peptide subfamilies, with strong evidence of positive selection among paralogs in a clade of gustatory receptors possibly involved in the detection of bitter compounds. In contrast, these gene families had little evidence of recent contraction via pseudogenization. Overall, our results are consistent with the hypothesis that in response to novel selection pressures, gene families that mediate ecological interactions may expand and contract predictably. Testing this hypothesis will require the comparative analysis of high‐quality annotation data from phylogenetically and ecologically diverse insect species and functionally diverse gene families. To this end, increasing sampling in under‐sampled hymenopteran lineages and environmentally responsive gene families and standardizing manual annotation methods should be prioritized.

Funder

Kentucky Science and Engineering Foundation

National Institute of Food and Agriculture

University of Kentucky

Publisher

Wiley

Subject

Nature and Landscape Conservation,Ecology,Ecology, Evolution, Behavior and Systematics

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