Protecting patient privacy in survival analyses

Author:

Bonomi Luca1,Jiang Xiaoqian2,Ohno-Machado Lucila13

Affiliation:

1. Department of Biomedical Informatics, UC San Diego Health, University of California, San Diego, La Jolla, California, USA

2. School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, Texas, USA

3. Division of Health Services Research and Development, VA San Diego Healthcare System, La Jolla, California, USA

Abstract

AbstractObjectiveSurvival analysis is the cornerstone of many healthcare applications in which the “survival” probability (eg, time free from a certain disease, time to death) of a group of patients is computed to guide clinical decisions. It is widely used in biomedical research and healthcare applications. However, frequent sharing of exact survival curves may reveal information about the individual patients, as an adversary may infer the presence of a person of interest as a participant of a study or of a particular group. Therefore, it is imperative to develop methods to protect patient privacy in survival analysis.Materials and MethodsWe develop a framework based on the formal model of differential privacy, which provides provable privacy protection against a knowledgeable adversary. We show the performance of privacy-protecting solutions for the widely used Kaplan-Meier nonparametric survival model.ResultsWe empirically evaluated the usefulness of our privacy-protecting framework and the reduced privacy risk for a popular epidemiology dataset and a synthetic dataset. Results show that our methods significantly reduce the privacy risk when compared with their nonprivate counterparts, while retaining the utility of the survival curves.DiscussionThe proposed framework demonstrates the feasibility of conducting privacy-protecting survival analyses. We discuss future research directions to further enhance the usefulness of our proposed solutions in biomedical research applications.ConclusionThe results suggest that our proposed privacy-protection methods provide strong privacy protections while preserving the usefulness of survival analyses.

Funder

National Heart, Lung, and Blood Institute

National Institute of General Medical Sciences

National Human Genome Research Institute

Publisher

Oxford University Press (OUP)

Subject

Health Informatics

Cited by 14 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. OASIS portable: User-friendly offline suite for secure survival analysis;Molecules and Cells;2024-02

2. Private Continuous Survival Analysis with Distributed Multi-Site Data;2023 IEEE International Conference on Big Data (BigData);2023-12-15

3. FedPseudo: Privacy-Preserving Pseudo Value-Based Deep Learning Models for Federated Survival Analysis;Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining;2023-08-04

4. Mitigating Membership Inference in Deep Survival Analyses with Differential Privacy;2023 IEEE 11th International Conference on Healthcare Informatics (ICHI);2023-06-26

5. dsSurvival 2.0: privacy enhancing survival curves for survival models in the federated DataSHIELD analysis system;BMC Research Notes;2023-06-06

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