Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol-Reference-Cited by-同舟云学术

Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol

Published:2018-09-20 Issue:11 Volume:7 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Nguyen Huy Quang¹²³,Vu Nguyen Thi-Hanh²,Chu Ha Hoang²³,Chu Son Ky⁴,Hoang Ha²,Tran Thanh Trung²,Nguyen Cuong⁵,Dinh Linh Thi-My²,Trinh Hien Thi-Thu²,Phi Tien Quyet²³

Affiliation:

1. University of Science and Technology of Hanoi (USTH), Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam

2. Institute of Biotechnology (IBT), Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam

3. Graduate University of Science and Technology (GUST), Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam

4. Hanoi University of Science and Technology (HUST), Hanoi, Vietnam

5. Gene Technology Department, Vinmec Research Institute of Stem Cell and Gene Technology, Hanoi, Vietnam

Abstract

This study reports the draft genome sequence of the endophytic Streptomyces cavourensis strain YBQ59, produces the antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. The draft genome sequence comprises ∼10.2 Mb, with a GC content of 64% and 8,958 predicted protein-coding genes, of which 14 gene clusters were found to associate with antibiotic biosynthetic pathways.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.01056-18

Reference10 articles.

1. Antimicrobial and Cytotoxic Properties of Bioactive Metabolites Produced by Streptomyces cavourensis YBQ59 Isolated from Cinnamomum cassia Prels in Yen Bai Province of Vietnam

2. Trimmomatic: a flexible trimmer for Illumina sequence data

3. Gladman S Seemann T. 2012. VelvetOptimiser 2.2.5. https://github.com/tseemann/VelvetOptimiser.

4. Prodigal: prokaryotic gene recognition and translation initiation site identification

5. GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions

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