Trimmomatic: a flexible trimmer for Illumina sequence data-Reference-Cited by-同舟云学术

Trimmomatic: a flexible trimmer for Illumina sequence data

Published:2014-04-01 Issue:15 Volume:30 Page:2114-2120
ISSN:1460-2059
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Bolger Anthony M.,Lohse Marc,Usadel Bjoern

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/30/15/2114/17143152/btu170.pdf

Reference10 articles.

1. Comparison of sequencing utility programs;Aronesty;Open Bioinform. J.,2013

2. The Newick utilities: high-throughput phylogenetic tree processing in the Unix shell;Junier;Bioinformatics,2010

3. Fast gapped-read alignment with Bowtie 2;Langmead;Nat. Methods,2012

4. Fast and accurate short read alignment with Burrows–Wheeler transform;Li;Bioinformatics,2009

5. A survey of sequence alignment algorithms for next-generation sequencing;Li;Brief. Bioinform.,2010

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