Automated Microscopic Analysis of Metal Sulfide Colonization by Acidophilic Microorganisms

Author:

Bellenberg Sören1,Buetti-Dinh Antoine23ORCID,Galli Vanni4,Ilie Olga23,Herold Malte5,Christel Stephan6ORCID,Boretska Mariia1,Pivkin Igor V.23,Wilmes Paul5,Sand Wolfgang178,Vera Mario9,Dopson Mark6ORCID

Affiliation:

1. Fakultät für Chemie, Biofilm Centre, Universität Duisburg-Essen, Essen, Germany

2. Institute of Computational Science, Faculty of Informatics, Università della Svizzera Italiana, Lugano, Switzerland

3. Swiss Institute of Bioinformatics, Lausanne, Switzerland

4. Institute for Information Systems and Networking, University of Applied Sciences of Southern Switzerland, Manno, Switzerland

5. Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg

6. Centre for Ecology and Evolution in Microbial Model Systems, Linnaeus University, Kalmar, Sweden

7. Donghua University, Shanghai, People's Republic of China

8. Technische Universität Bergakademie Freiberg, Freiberg, Germany

9. Institute for Biological and Medical Engineering, Schools of Engineering, Medicine & Biological Sciences, Department of Hydraulic & Environmental Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile

Abstract

The presented method for the assessment of mineral colonization allows accurate relative comparisons of the microbial colonization of metal sulfide concentrate particles in a time-resolved manner. Quantitative assessment of the mineral colonization development is important for the compilation of improved mathematical models for metal sulfide dissolution. In addition, deep-learning algorithms proved that axenic or mixed cultures of the three species exhibited characteristic biofilm patterns and predicted the biofilm species composition. The method may be extended to the assessment of microbial colonization on other solid particles and may serve in the optimization of bioleaching processes in laboratory scale experiments with industrially relevant metal sulfide concentrates. Furthermore, the method was used to demonstrate that DSF quorum sensing signals directly influence colonization and dissolution of metal sulfides by mineral-oxidizing bacteria, such as L. ferriphilum and S. thermosulfidooxidans .

Funder

Vetenskapsrådet

Bundesministerium für Bildung und Forschung

Fondo Nacional de Desarrollo Científico y Tecnológico

Publisher

American Society for Microbiology

Subject

Ecology,Applied Microbiology and Biotechnology,Food Science,Biotechnology

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