Comparison of TaqMan PCR Assays for Detection of the Melioidosis Agent Burkholderia pseudomallei in Clinical Specimens

Author:

Kaestli Mirjam1,Richardson Leisha J.1,Colman Rebecca E.2,Tuanyok Apichai3,Price Erin P.3,Bowers Jolene R.2,Mayo Mark1,Kelley Erin2,Seymour Meagan L.3,Sarovich Derek S.3,Pearson Talima3,Engelthaler David M.2,Wagner David M.3,Keim Paul S.23,Schupp James M.2,Currie Bart J.14

Affiliation:

1. Global and Tropical Health Division, Menzies School of Health Research, Charles Darwin University, Darwin, Northern Territory, Australia

2. Translational Genomics Research Institute, Flagstaff, Arizona, USA

3. Center for Microbial Genetics and Genomics, Northern Arizona University, Flagstaff, Arizona, USA

4. Department of Infectious Diseases, Northern Territory Clinical School, Royal Darwin Hospital, Darwin, Northern Territory, Australia

Abstract

ABSTRACT Melioidosis is an emerging infectious disease caused by the soil bacterium Burkholderia pseudomallei . In diagnostic and forensic settings, molecular detection assays need not only high sensitivity with low limits of detection but also high specificity. In a direct comparison of published and newly developed TaqMan PCR assays, we found the TTS1- orf2 assay to be superior in detecting B. pseudomallei directly from clinical specimens. The YLF/BTFC multiplex assay (targeting the Yersinia -like fimbrial/ Burkholderia thailandensis -like flagellum and chemotaxis region) also showed high diagnostic sensitivity and provides additional information on possible geographic origin.

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

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