Normalization of ChIP-seq data with control
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/1471-2105-13-199.pdf
Reference21 articles.
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2. Ramagopalan S, Heger A, Berlanga A, Maugeri N, Lincoln M, Burrell A, Handunnetthi L, Handel A, Disanto G, Orton S: A ChIP-seq defined genome-wide map of vitamin D receptor binding: Associations with disease and evolution. Genome Res 2010, 20(10):1352. 10.1101/gr.107920.110
3. Smagulova F, Gregoretti I, Brick K, Khil P, Camerini-Otero R, Petukhova G: Genome-wide analysis reveals novel molecular features of mouse recombination hotspots. Nature 2011, 472(7343):375–378. 10.1038/nature09869
4. Park P: ChIP–seq: advantages and challenges of a maturing technology. Nat Rev Genet 2009, 10(10):669–680. 10.1038/nrg2641
5. Xu H, Handoko L, Wei X, Ye C, Sheng J, Wei C, Lin F, Sung W: A signal–noise model for significance analysis of ChIP-seq with negative control. Bioinformatics 2010, 26(9):1199–1204. 10.1093/bioinformatics/btq128
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