GOSim – an R-package for computation of information theoretic GO similarities between terms and gene products-Reference-Cited by-同舟云学术

GOSim – an R-package for computation of information theoretic GO similarities between terms and gene products

Published:2007-05-22 Issue:1 Volume:8 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Fröhlich Holger,Speer Nora,Poustka Annemarie,Beißbarth Tim

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-8-166.pdf

Reference17 articles.

1. Eisen M, Spellman P, Botstein D, Brown P: Cluster Analysis and Display of Genome-wide Expression Patterns. Proceedings of the National Academy of Sciences, USA. 1998, 95: 14863-14867. 10.1073/pnas.95.25.14863.

2. The Gene Ontology Consortium: The Gene Ontology (GO) database and informatics resource. Nucleic Acids Research. 2004, 32: D258-D261. 10.1093/nar/gkh036.

3. Resnik P: Using Information Content to Evaluate Semantic Similarity in a Taxonomy. Proceedings of the 14th International Joint Conference on Artificial Intelligence, Montreal. 1995, 1: 448-453.

4. Resnik P: Semantic Similarity in a Taxonomy: An information-based measure and its application to problems of ambigiguity in natural language. Journal of Artificial Intelligence Research. 1999, 11: 95-130.

5. Lin D: An information-theoretic definition of similarity. Proceedings of the 15th International Conference on Machine Learning, San Francisco, CA. Edited by: Kaufmann M. 1998, 1: 296-304.

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