A local average distance descriptor for flexible protein structure comparison-Reference-Cited by-同舟云学术

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A local average distance descriptor for flexible protein structure comparison

Published:2014-04-02 Issue:1 Volume:15 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Wang Hsin-Wei,Chu Chia-Han,Wang Wen-Ching,Pai Tun-Wen

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

https://link.springer.com/content/pdf/10.1186/1471-2105-15-95.pdf

Reference66 articles.

1. Hasegawa H, Holm L: Advances and pitfalls of protein structural alignment. Curr Opin Struct Biol. 2009, 19 (3): 341-348. 10.1016/j.sbi.2009.04.003.

2. Shindyalov IN, Bourne PE: Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. Protein Eng. 1998, 11 (9): 739-747. 10.1093/protein/11.9.739.

3. Holm L, Park J: DaliLite workbench for protein structure comparison. Bioinformatics. 2000, 16 (6): 566-567. 10.1093/bioinformatics/16.6.566.

4. Wang S, Zheng WM: CLePAPS: fast pair alignment of protein structures based on conformational letters. J Bioinform Comput Biol. 2008, 6 (2): 347-366. 10.1142/S0219720008003461.

5. Zhu J, Weng Z: FAST: a novel protein structure alignment algorithm. Proteins. 2005, 58 (3): 618-627.

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