Using NMR Chemical Shifts and Cryo-EM Density Restraints in Iterative Rosetta-MD Protein Structure Refinement-Reference-Cited by-同舟云学术

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Using NMR Chemical Shifts and Cryo-EM Density Restraints in Iterative Rosetta-MD Protein Structure Refinement

Published:2019-12-24 Issue:5 Volume:60 Page:2522-2532
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Leelananda Sumudu P.¹,Lindert Steffen¹^ORCID

Affiliation:

1. Department of Chemistry and Biochemistry, Ohio State University, Columbus, Ohio 43210, United States

Funder

Division of Chemistry

Dr. Ralph and Marian Falk Medical Research Trust

National Heart, Lung, and Blood Institute

National Institute of Allergy and Infectious Diseases

National Institute on Aging

National Institute of General Medical Sciences

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.9b00932

Reference72 articles.

1. The Causal Relations between Structure and Function in Biology

2. Predicting protein function from sequence and structure

3. Computational methods in drug discovery

4. Modelling three-dimensional protein structures for applications in drug design

5. The Process of Structure-Based Drug Design

Cited by 21 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. The State-of-the-Art Overview to Application of Deep Learning in Accurate Protein Design and Structure Prediction;Topics in Current Chemistry;2024-07-04

2. Predicting ion mobility collision cross sections using projection approximation with ROSIE-PARCS webserver;Briefings in Bioinformatics;2023-08-22

3. NMR-Chemical-Shift-Driven Protocol Reveals the Cofactor-Bound, Complete Structure of Dynamic Intermediates of the Catalytic Cycle of Oncogenic KRAS G12C Protein and the Significance of the Mg2+ Ion;International Journal of Molecular Sciences;2023-07-28

4. CryoFold 2.0: Cryo-EM Structure Determination with MELD;The Journal of Physical Chemistry A;2023-04-21

5. Predicting binding affinity changes from long‐distance mutations using molecular dynamics simulations and Rosetta;Proteins: Structure, Function, and Bioinformatics;2023-03-02

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