Trans Hoogsteen/Sugar Edge Base Pairing in RNA. Structures, Energies, and Stabilities from Quantum Chemical Calculations-Reference-Cited by-同舟云学术

Trans Hoogsteen/Sugar Edge Base Pairing in RNA. Structures, Energies, and Stabilities from Quantum Chemical Calculations

Published:2009-01-16 Issue:6 Volume:113 Page:1743-1755
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Mládek Arnošt¹,Sharma Purshotam¹,Mitra Abhijit¹,Bhattacharyya Dhananjay¹,Šponer Jiří¹,Šponer Judit E.¹

Affiliation:

1. Institute of Biophysics, Academy of Sciences of the Czech Republic, Královopolská 135, 612 65 Brno, Czech Republic, Center for Computational Natural Sciences and Bioinformatics (CCNSB), International Institute of Information Technology (IIIT-H) Gachibowli, Hyderabad 500032, India, Biophysics Division, Saha Institute of Nuclear Physics (SINP), 1/AF, Bidhannagar, Kolkata 700064, India, and Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo náměstí 2, 166...

Publisher

American Chemical Society (ACS)

Subject

Materials Chemistry,Surfaces, Coatings and Films,Physical and Theoretical Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/jp808357m

Reference74 articles.

1. Conserved geometrical base-pairing patterns in RNA

2. The non-Watson-Crick base pairs and their associated isostericity matrices

3. The 5S rRNA loop E: Chemical probing and phylogenetic data versus crystal structure

4. Recurrent structural RNA motifs, Isostericity Matrices and sequence alignments

5. FR3D: finding local and composite recurrent structural motifs in RNA 3D structures

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