FR3D: finding local and composite recurrent structural motifs in RNA 3D structures-Reference-Cited by-同舟云学术

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FR3D: finding local and composite recurrent structural motifs in RNA 3D structures

Published:2007-08-11 Issue:1-2 Volume:56 Page:215-252
ISSN:0303-6812
Container-title:Journal of Mathematical Biology
language:en
Short-container-title:J. Math. Biol.

Author:

Sarver Michael,Zirbel Craig L.,Stombaugh Jesse,Mokdad Ali,Leontis Neocles B.

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Agricultural and Biological Sciences (miscellaneous),Modeling and Simulation

Link

http://link.springer.com/content/pdf/10.1007/s00285-007-0110-x.pdf

Reference45 articles.

1. Adams P.L., Stahley M.R., Kosek A.B., Wang J. and Strobel S.A. (2004). Crystal structure of a self-splicing group I intron with both exons. Nature 430(6995): 45–50

2. Babcock M.S., Pednaul T.E.P. and Olson W.K. (1994). Nucleic acid structure analysis. mathematics for local Cartesian and helical structure parameters that are truly comparable between structures. J. Mol. Biol. 237(1): 125–156

3. Ban N., Nissen P., Hansen J., Moore P.B. and Steitz T.A. (2000). The complete atomic structure of the large ribosomal subunit at 2.4 A resolution. Science 289(5481): 905–920

4. Bayley M.J., Gardiner E.J., Willett P. and Artymiuk P.J. (2005). A fourier fingerprint-based method for protein surface representation. J. Chem. Inf. Model 45(3): 696–707

5. Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N. and Bourne P.E. (2000). The Protein Data Bank. Nucleic Acids Res. 28(1): 235–242

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