Chemometric Analysis for the Prediction of Biochemical Compounds in Leaves Using UV-VIS-NIR-SWIR Hyperspectroscopy

Author:

Falcioni Renan1ORCID,Gonçalves João Vitor Ferreira1ORCID,de Oliveira Karym Mayara1,de Oliveira Caio Almeida1,Reis Amanda Silveira1ORCID,Crusiol Luis Guilherme Teixeira2,Furlanetto Renato Herrig3,Antunes Werner Camargos1ORCID,Cezar Everson4ORCID,de Oliveira Roney Berti1ORCID,Chicati Marcelo Luiz1ORCID,Demattê José Alexandre M.5ORCID,Nanni Marcos Rafael1ORCID

Affiliation:

1. Graduate Program in Agronomy, Department of Agronomy, State University of Maringá, Av. Colombo 5790, Maringá 87020-900, PR, Brazil

2. Embrapa Soja (National Soybean Research Centre–Brazilian Agricultural Research Corporation), Londrina 86001-970, PR, Brazil

3. Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL 32611, USA

4. Department of Agricultural and Earth Sciences, University of Minas Gerais State, Passos 37902-108, MG, Brazil

5. Department of Soil Science, Luiz de Queiroz College of Agriculture, University of São Paulo, Av. Pádua Dias 11, Piracicaba 13418-260, SP, Brazil

Abstract

Reflectance hyperspectroscopy is recognised for its potential to elucidate biochemical changes, thereby enhancing the understanding of plant biochemistry. This study used the UV-VIS-NIR-SWIR spectral range to identify the different biochemical constituents in Hibiscus and Geranium plants. Hyperspectral vegetation indices (HVIs), principal component analysis (PCA), and correlation matrices provided in-depth insights into spectral differences. Through the application of advanced algorithms—such as PLS, VIP, iPLS-VIP, GA, RF, and CARS—the most responsive wavelengths were discerned. PLSR models consistently achieved R2 values above 0.75, presenting noteworthy predictions of 0.86 for DPPH and 0.89 for lignin. The red-edge and SWIR bands displayed strong associations with pivotal plant pigments and structural molecules, thus expanding the perspectives on leaf spectral dynamics. These findings highlight the efficacy of spectroscopy coupled with multivariate analysis in evaluating the management of biochemical compounds. A technique was introduced to measure the photosynthetic pigments and structural compounds via hyperspectroscopy across UV-VIS-NIR-SWIR, underpinned by rapid multivariate PLSR. Collectively, our results underscore the burgeoning potential of hyperspectroscopy in precision agriculture. This indicates a promising paradigm shift in plant phenotyping and biochemical evaluation.

Funder

National Council for Scientific and Technological Development

Fundação Araucária

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior

Fundação de Amparo à Pesquisa do Estado de São Paulo

CEAGRE—Centro de Excelência em Agricultura Exponencial

Publisher

MDPI AG

Subject

Plant Science,Ecology,Ecology, Evolution, Behavior and Systematics

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