Production of Modified Nucleosides in a Continuous Enzyme Membrane Reactor

Author:

Thiele Isabel1ORCID,Yehia Heba12ORCID,Krausch Niels1ORCID,Birkholz Mario3ORCID,Cruz Bournazou Mariano Nicolas14ORCID,Sitanggang Azis Boing5ORCID,Kraume Matthias6ORCID,Neubauer Peter1ORCID,Kurreck Anke17

Affiliation:

1. Department of Bioprocess Engineering, Institute of Biotechnology, Technische Universität Berlin, Ackerstr. 71-76, ACK24, 13355 Berlin, Germany

2. Department of Chemistry of Natural and Microbial Products, Pharmaceutical and Drug Industries Research Institute, National Research Centre, Dokki, Cairo 12622, Egypt

3. IHP—Leibniz-Institut für Innovative Mikroelektronik, Im Technologiepark 25, 15236 Frankfurt (Oder), Germany

4. DataHow AG, Hagenholzstrasse.111, 8050 Zurich, Switzerland

5. Department of Food Science and Technology, IPB University, Kampus IPB Darmaga, Bogor 16680, Indonesia

6. Department of Chemical and Process Engineering, Technische Universität Berlin, Straße des 17. Juni 135, 10623 Berlin, Germany

7. BioNukleo GmbH, Ackerstr. 76, 13355 Berlin, Germany

Abstract

Nucleoside analogues are important compounds for the treatment of viral infections or cancers. While (chemo-)enzymatic synthesis is a valuable alternative to traditional chemical methods, the feasibility of such processes is lowered by the high production cost of the biocatalyst. As continuous enzyme membrane reactors (EMR) allow the use of biocatalysts until their full inactivation, they offer a valuable alternative to batch enzymatic reactions with freely dissolved enzymes. In EMRs, the enzymes are retained in the reactor by a suitable membrane. Immobilization on carrier materials, and the associated losses in enzyme activity, can thus be avoided. Therefore, we validated the applicability of EMRs for the synthesis of natural and dihalogenated nucleosides, using one-pot transglycosylation reactions. Over a period of 55 days, 2′-deoxyadenosine was produced continuously, with a product yield >90%. The dihalogenated nucleoside analogues 2,6-dichloropurine-2′-deoxyribonucleoside and 6-chloro-2-fluoro-2′-deoxyribonucleoside were also produced, with high conversion, but for shorter operation times, of 14 and 5.5 days, respectively. The EMR performed with specific productivities comparable to batch reactions. However, in the EMR, 220, 40, and 9 times more product per enzymatic unit was produced, for 2′-deoxyadenosine, 2,6-dichloropurine-2′-deoxyribonucleoside, and 6-chloro-2-fluoro-2′-deoxyribonucleoside, respectively. The application of the EMR using freely dissolved enzymes, facilitates a continuous process with integrated biocatalyst separation, which reduces the overall cost of the biocatalyst and enhances the downstream processing of nucleoside production.

Funder

DAAD through the GERLS program

Publisher

MDPI AG

Subject

Inorganic Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Computer Science Applications,Spectroscopy,Molecular Biology,General Medicine,Catalysis

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