Delimitation of Some Taxa of Ulnaria and Fragilaria (Bacillariophyceae) Based on Genetic, Morphological Data and Mating Compatibility

Author:

Zakharova Yulia1ORCID,Marchenkov Artyom1ORCID,Petrova Darya1,Bukin Yurij1ORCID,Morozov Aleksey1ORCID,Bedoshvili Yekaterina1ORCID,Podunay Yulia2ORCID,Davidovich Olga2ORCID,Davidovich Nikolai2ORCID,Bondar Alexander3ORCID,Kahlert Maria4ORCID,Likhoshway Yelena1ORCID

Affiliation:

1. Limnological Institute, Siberian Branch of the Russian Academy of Sciences, 3 Ulan-Batorskaya, 664033 Irkutsk, Russia

2. T.I. Vyazemsky Karadag Scientific Station of A.O., Kovalevskii Institute of Biology of the Southern Seas of the Russian Academy of Sciences, 24 Nauki Str., Kurortnoe, 298188 Feodosia, Russia

3. Genomics Core Facility of the Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia

4. Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-750 07 Uppsala, Sweden

Abstract

Fragilaria and Ulnaria are two closely related diatom genera for which the delimitation and circumscription of several species is unclear. We studied strains isolated from Lake Baikal and compared them with the species from freshwater reservoirs in Europe and Asia using phylogenetic and species delimitation methods, microscopy and interclonal crossing experiments. The results of the phylogenetic analyses of the fragments of rbcL and 18S rRNA genes revealed that baikalian F. radians clade was independent from the representatives of the genus from other localities. Among Ulnaria we found the following 18S rRNA phylogenetic tree groups at species level: U. acus, U. ulna and U. danica. Genetic distance between genera varied between 3.9–10.2% substitutions in rbcL gene and 3.2–11.5% in 18S rRNA. The boundary between intraspecies and interspecies polymorphism for studied species of Ulnaria and Fragilaria in these marker genes was around 0.8% substitutions. Morphometric characters of individual strains showed their variability and division into F. radians, U. acus and U. ulna together with U. danica. Strains of U. acus and U. danica from different localities of Europe and Asia were sexually compatible inside the species. Sexual reproduction has never been observed in monoclonal cultures, either between this species or with strains of the Fragilaria.

Funder

Ministry of Science and Higher Education of Russian Federation

Swedish Agency for Marine and Water Management

Publisher

MDPI AG

Subject

Nature and Landscape Conservation,Agricultural and Biological Sciences (miscellaneous),Ecological Modeling,Ecology

Reference76 articles.

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2. Hofmann, G., Lange-Bertalot, H., and Werum, M. (2011). Diatomeen Im Su.Wasser-Benthos Von Mitteleuropa, Koeltz Scientific Books. [2nd ed.].

3. Connecting the morphological and molecular species concepts to facilitate species identification within the genus Fragilaria (Bacillariophyta);Kahlert;J. Phycol.,2019

4. Microevolution and speciation in Thalassiosira weissflogii (Bacillariophyta);Sorhannus;Protist,2010

5. Genetic differentiation among populations of the planktonic marine diatom Ditylum brightwellii (Bacillariophyceae);Rynearson;J. Phycol.,2004

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