Affiliation:
1. Limnological Institute, Siberian Branch of the Russian Academy of Sciences, 3 Ulan-Batorskaya St., Irkutsk 664033, Russia
Abstract
Two diatom species, Ulnaria acus and Fragilaria radians, are morphologically very similar and often coexist, which makes it difficult to compare their abundances. However, they are easily separated by molecular data; thus, in this work, we attempted to estimate the differences in their spatial and temporal distribution from existing metabarcoding datasets. Reanalyzing published sequences with an ASV-based pipeline and ad hoc classification routine allowed us to estimate the relative abundances of the two species, increasing the precision compared to usual OTU-based analyses. Existing data permit qualitative comparisons between two species that cannot be differentiated by other methods, detecting the distinct seasonal peaks and spatial distributions of F. radians and U. acus.
Funder
Ministry of Science and Higher Education of the Russian Federation
Subject
Nature and Landscape Conservation,Agricultural and Biological Sciences (miscellaneous),Ecological Modeling,Ecology
Cited by
1 articles.
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