Codon degeneracy and amino acid abundance influence the measures of codon usage bias: improved Nc (N̂c) and ENCprime (N̂′c) measures-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

Codon degeneracy and amino acid abundance influence the measures of codon usage bias: improved Nc (N̂c) and ENCprime (N̂′c) measures

Published:2017-02-10 Issue:3 Volume:22 Page:277-283
ISSN:1356-9597
Container-title:Genes to Cells
language:en
Short-container-title:Genes Cells

Author:

Satapathy Siddhartha Sankar¹,Sahoo Ajit Kumar²,Ray Suvendra Kumar²,Ghosh Tapash Chandra³

Affiliation:

1. Department of Computer Science and Engineering; Tezpur University; Napaam Tezpur 784028 Assam India

2. Department of Molecular Biology and Biotechnology; Tezpur University; Napaam Tezpur 784028 Assam India

3. Bioinformatics Centre; Bose Institute; P-1/12, C.I.T. Scheme VII M Kolkata 700054 India

Publisher

Wiley

Subject

Cell Biology,Genetics

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1111/gtc.12474/fullpdf

Reference24 articles.

1. Towards a resolution on the inherent methodological weakness of the “effective number of codons used by a gene”;Banerjee;Biochem. Biophys. Res. Commun.,2005

2. Synonymous codon usage in bacteria;Ermolaeva;Curr. Issues Mol. Biol.,2001

3. The effective number of codons for individual amino acids: some codons are more optimal than others;Fuglsang;Gene,2003

4. The ‘effective number of codons’ revisited;Fuglsang;Biochem. Biophys. Res. Commun.,2004

5. On the methodological weakness of ‘the effective number of codons’: a reply to Marashi and Najafabadi;Fuglsang;Biochem. Biophys. Res. Commun.,2005

Cited by 25 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Understanding the nucleotide composition and patterns of codon usage in the expression of human oral cancer genes;Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis;2024-07

2. Compositional Features and Codon Usage Pattern of Genes Associated with Parkinson’s Disease;Molecular Neurobiology;2024-03-15

3. The Causes for Genomic Instability and How to Try and Reduce Them Through Rational Design of Synthetic DNA;Methods in Molecular Biology;2024

4. Difference in synonymous polymorphism related to codon degeneracy between co-transcribed genes in the genome of Escherichia coli;CURR SCI INDIA;2023

5. Codon usage bias study of the Vitamin D receptor (VDR) gene of Multiple Sclerosis and Diabetes-1 patients;2023-07-07

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3