FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS
Author:
Publisher
Elsevier BV
Subject
General Engineering
Reference24 articles.
1. Heather J Cordell. Detecting Gene-Gene Interactions that Underlie Human Diseases. Nature Review Genetics, 10(6):392-404, 2009.
2. Gibran Hemani, Athanasios Theocharidis, Wenhua Wei, and Chris Haley. EpiGPU: exhaustive pairwise epistasis scans parallelized on consumer level graphics cards. Bioinformatics, 27(11):1462-1465, April 2011.
3. Xiaohan Hu, Qiang Liu, Zhao Zhang, Zhiqiang Li, Shilin Wang, Lin He, and Yongyong Shi. SHEsisEpi, a GPU-enhanced genome-wide SNP-SNP interaction scanning algorithm, efficiently reveals the risk genetic epistasis in bipolar disorder. Cell Research, 20:854-857, May 2010.
4. François Van Lishout, Jestinah M Mahachie John, Elena S Gusareva1, Victor Urrea, Isabelle Cleynen, Emilie Théâtre, Benoît Charloteaux, Malu Luz Calle, Louis Wehenkel, and Kristel Van Steen. An efficient algorithm to perform multiple testing in epistasis screening. BMC Bioinformatics, 14(138), April 2013.
5. Brendan Maher. Personal Genomes: the Case of the Missing Heritability. Nature, 456(7218):18-21, 2008.
Cited by 23 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Accelerated Spiking Convolutional Neural Networks for Scalable Population Genomics;14th International Symposium on Highly Efficient Accelerators and Reconfigurable Technologies (HEART'24));2024-06-19
2. Discovering SNP-disease relationships in genome-wide SNP data using an improved harmony search based on SNP locus and genetic inheritance patterns;PLOS ONE;2023-10-13
3. A biobank-scale test of marginal epistasis reveals genome-wide signals of polygenic epistasis;2023-09-12
4. Fast kernel-based association testing of non-linear genetic effects for biobank-scale data;Nature Communications;2023-08-15
5. A Survey of Processing Systems for Phylogenetics and Population Genetics;ACM Transactions on Reconfigurable Technology and Systems;2023-06-20
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3