BUSCO: Assessing Genome Assembly and Annotation Completeness
Author:
Publisher
Springer New York
Link
http://link.springer.com/content/pdf/10.1007/978-1-4939-9173-0_14
Reference25 articles.
1. Vurture GW, Sedlazeck FJ, Nattestad M et al (2017) GenomeScope: fast reference-free genome profiling from short reads. Bioinformatics 33:2202–2204. https://doi.org/10.1093/bioinformatics/btx153
2. Chikhi R, Medvedev P (2014) Informed and automated k-mer size selection for genome assembly. Bioinformatics 30:31–37. https://doi.org/10.1093/bioinformatics/btt310
3. Hunt M, Kikuchi T, Sanders M et al (2013) REAPR: a universal tool for genome assembly evaluation. Genome Biol 14:R47. https://doi.org/10.1186/gb-2013-14-5-r47
4. Simão FA, Waterhouse RM, Ioannidis P et al (2015) BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. Bioinformatics 31:3210–3212. https://doi.org/10.1093/bioinformatics/btv351
5. Waterhouse RM, Seppey M, Simão FA et al (2018) BUSCO applications from quality assessments to gene prediction and phylogenomics. Mol Biol Evol 35:543–548. https://doi.org/10.1093/molbev/msx319
Cited by 1630 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. Transcriptome-based protein-protein interaction analysis reveals immune gene network elucidating white body immunity mechanisms in response to LPS stimulation in Amphioctopus fangsiao;Comparative Immunology Reports;2024-12
2. Genomic differentiation and interoceanic population structure of two large pelagic scombrid species;Global Ecology and Conservation;2024-10
3. Fermentative metabolic features of doenjang-meju as revealed by genome-centered metatranscriptomics;Food Chemistry: X;2024-10
4. The adult shell matrix protein repertoire of the marine snail Crepidula is dominated by conserved genes that are also expressed in larvae;BMC Ecology and Evolution;2024-09-14
5. De novo assembly of sialotranscriptome of Hyalomma anatolicum and insights into expression dynamics in response to Theileria annulata infection;Experimental and Applied Acarology;2024-09-13
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3