Remarkable Reproducibility of Enzyme Activity Profiles in Tomato Fruits Grown under Contrasting Environments Provides a Roadmap for Studies of Fruit Metabolism

Author:

Biais Benoît123,Bénard Camille1234,Beauvoit Bertrand123,Colombié Sophie123,Prodhomme Duyên123,Ménard Guillaume123,Bernillon Stéphane123,Gehl Bernadette5,Gautier Hélène4,Ballias Patricia123,Mazat Jean-Pierre2,Sweetlove Lee5,Génard Michel4,Gibon Yves123

Affiliation:

1. Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1332 Biologie du Fruit et Pathologie, F–33883 Villenave d’Ornon, France (B.Bi., C.B., B.Be., S.C., D.P., G.M., S.B., P.B., Y.G.)

2. University of Bordeaux, Département Sciences de la Vie et de la Santé, F–33076 Bordeaux cedex, France (B.Bi., C.B., B.Be., S.C., D.P., G.M., S.B., P.B., J.-P.M., Y.G.)

3. Plateforme Métabolome Bordeaux, Institut National de la Recherche Agronomique—Bordeaux, F–33883 Villenave d'Ornon, France (B.Bi., C.B., B.Be., S.C., D.P., G.M., S.B., P.B., Y.G.)

4. Institut National de la Recherche Agronomique, Unité de Recherche 1115 Plantes et Systèmes de culture Horticoles, F–84914 Avignon cedex 9, France (C.B., H.G., M.G.); and

5. Department of Plant Sciences, University of Oxford, Oxford OX1 3RB, United Kingdom (B.G., L.S.)

Abstract

Abstract To assess the influence of the environment on fruit metabolism, tomato (Solanum lycopersicum ‘Moneymaker’) plants were grown under contrasting conditions (optimal for commercial, water limited, or shaded production) and locations. Samples were harvested at nine stages of development, and 36 enzyme activities of central metabolism were measured as well as protein, starch, and major metabolites, such as hexoses, sucrose, organic acids, and amino acids. The most remarkable result was the high reproducibility of enzyme activities throughout development, irrespective of conditions or location. Hierarchical clustering of enzyme activities also revealed tight relationships between metabolic pathways and phases of development. Thus, cell division was characterized by high activities of fructokinase, glucokinase, pyruvate kinase, and tricarboxylic acid cycle enzymes, indicating ATP production as a priority, whereas cell expansion was characterized by enzymes involved in the lower part of glycolysis, suggesting a metabolic reprogramming to anaplerosis. As expected, enzymes involved in the accumulation of sugars, citrate, and glutamate were strongly increased during ripening. However, a group of enzymes involved in ATP production, which is probably fueled by starch degradation, was also increased. Metabolites levels seemed more sensitive than enzymes to the environment, although such differences tended to decrease at ripening. The integration of enzyme and metabolite data obtained under contrasting growth conditions using principal component analysis suggests that, with the exceptions of alanine amino transferase and glutamate and malate dehydrogenase and malate, there are no links between single enzyme activities and metabolite time courses or levels.

Publisher

Oxford University Press (OUP)

Subject

Plant Science,Genetics,Physiology

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