Anabel: An Online Tool for the Real-Time Kinetic Analysis of Binding Events

Author:

Krämer Stefan D12ORCID,Wöhrle Johannes13,Rath Christin1245,Roth Günter1245

Affiliation:

1. Center for Biological Systems Analysis (ZBSA), University of Freiburg, Freiburg, Germany

2. Faculty for Biology, University of Freiburg, Freiburg, Germany

3. Department of Microsystems Engineering (IMTEK), University of Freiburg, Freiburg, Germany

4. BioCopy GmbH, Freiburg, Germany

5. BIOSS Center for Biological Signaling Studies, University of Freiburg, Freiburg, Germany

Abstract

Anabel ( Analysis of binding events +  l) is an open source online software tool ( www.skscience.org/anabel ) for the convenient analysis of molecular binding interactions. Currently, exported datasets from Biacore (surface plasmon resonance [SPR]), FortéBio (biolayer interference [BLI]), and Biametrics (single color reflectometry [SCORE]) can be uploaded and evaluated in Anabel using 2 different evaluation methods. Moreover, a universal data template format is provided to upload any other binding dataset to Anabel. This enables an easier comparison of different analysis methods for all users. Furthermore, a guide was established in Anabel to help inexperienced users to obtain optimal results. In addition, expert features can be used to optimize and control the fit of the binding model to the measured data. We tried to make the process of fitting and evaluating as easy as possible through the use of an intuitive user interface. At the end of every analysis, a single excel file, containing all results and graphs of the performed analysis, can be downloaded.

Publisher

SAGE Publications

Subject

Applied Mathematics,Computational Mathematics,Computer Science Applications,Molecular Biology,Biochemistry

Reference14 articles.

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