Using Artificial Intelligence to Detect, Classify, and Objectively Score Severity of Rodent Cardiomyopathy

Author:

Tokarz Debra A.1ORCID,Steinbach Thomas J.1ORCID,Lokhande Avinash2,Srivastava Gargi2,Ugalmugle Rajesh2,Co Caroll A.3,Shockley Keith R.4,Singletary Emily1,Cesta Mark F.5ORCID,Thomas Heath C.6,Chen Vivian S.7,Hobbie Kristen8,Crabbs Torrie A.1

Affiliation:

1. Experimental Pathology Laboratories, Inc, Research Triangle Park, NC, USA

2. AIRA Matrix Private Limited, Mumbai, India

3. Social and Scientific Systems, Durham, NC, USA

4. Biostatistics and Computational Biology Branch, Division of Intramural Research, National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA

5. National Toxicology Program, National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA

6. Aclairo Pharmaceutical Development Group, Vienna, VA, USA

7. Charles River Laboratories Inc, Durham, NC, USA

8. Integrated Laboratory Systems, LLC, Research Triangle Park, NC, USA

Abstract

Rodent progressive cardiomyopathy (PCM) encompasses a constellation of microscopic findings commonly seen as a spontaneous background change in rat and mouse hearts. Primary histologic features of PCM include varying degrees of cardiomyocyte degeneration/necrosis, mononuclear cell infiltration, and fibrosis. Mineralization can also occur. Cardiotoxicity may increase the incidence and severity of PCM, and toxicity-related morphologic changes can overlap with those of PCM. Consequently, sensitive and consistent detection and quantification of PCM features are needed to help differentiate spontaneous from test article-related findings. To address this, we developed a computer-assisted image analysis algorithm, facilitated by a fully convolutional network deep learning technique, to detect and quantify the microscopic features of PCM (degeneration/necrosis, fibrosis, mononuclear cell infiltration, mineralization) in rat heart histologic sections. The trained algorithm achieved high values for accuracy, intersection over union, and dice coefficient for each feature. Further, there was a strong positive correlation between the percentage area of the heart predicted to have PCM lesions by the algorithm and the median severity grade assigned by a panel of veterinary toxicologic pathologists following light microscopic evaluation. By providing objective and sensitive quantification of the microscopic features of PCM, deep learning algorithms could assist pathologists in discerning cardiotoxicity-associated changes.

Publisher

SAGE Publications

Subject

Cell Biology,Toxicology,Molecular Biology,Pathology and Forensic Medicine

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1. Inter-Rater and Intra-Rater Agreement in Scoring Severity of Rodent Cardiomyopathy and Relation to Artificial Intelligence–Based Scoring;Toxicologic Pathology;2024-06-22

2. Advancements in Cardiotoxicity Detection and Assessment through Artificial Intelligence: A Comprehensive Review;2024 4th International Conference on Innovative Research in Applied Science, Engineering and Technology (IRASET);2024-05-16

3. Molecular Pathology: Applications in Nonclinical Drug Development;A Comprehensive Guide to Toxicology in Nonclinical Drug Development;2024

4. Computational approaches for hematopoietic stem cells;Computational Biology for Stem Cell Research;2024

5. New Evidences of the Anti-SARS-CoV-2 Vaccine Candidate FINLAY-FR-02 Effects on Immune System Using Morphometric Techniques;Mediterranean Journal of Infection Microbes and Antimicrobials;2023-09-21

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