Epithelial-to-mesenchymal transition proceeds through directional destabilization of multidimensional attractor

Author:

Wang Weikang1ORCID,Poe Dante12ORCID,Yang Yaxuan1ORCID,Hyatt Thomas3ORCID,Xing Jianhua134ORCID

Affiliation:

1. Department of Computational and Systems Biology, University of Pittsburgh

2. Joint CMU-Pitt Ph.D. Program in Computational Biology, University of Pittsburgh

3. Department of Physics and Astronomy, University of Pittsburgh

4. UPMC-Hillman Cancer Center, University of Pittsburgh

Abstract

How a cell changes from one stable phenotype to another one is a fundamental problem in developmental and cell biology. Mathematically, a stable phenotype corresponds to a stable attractor in a generally multi-dimensional state space, which needs to be destabilized so the cell relaxes to a new attractor. Two basic mechanisms for destabilizing a stable fixed point, pitchfork and saddle-node bifurcations, have been extensively studied theoretically; however, direct experimental investigation at the single-cell level remains scarce. Here, we performed live cell imaging studies and analyses in the framework of dynamical systems theories on epithelial-to-mesenchymal transition (EMT). While some mechanistic details remain controversial, EMT is a cell phenotypic transition (CPT) process central to development and pathology. Through time-lapse imaging we recorded single cell trajectories of human A549/Vim-RFP cells undergoing EMT induced by different concentrations of exogenous TGF-β in a multi-dimensional cell feature space. The trajectories clustered into two distinct groups, indicating that the transition dynamics proceeds through parallel paths. We then reconstructed the reaction coordinates and the corresponding quasi-potentials from the trajectories. The potentials revealed a plausible mechanism for the emergence of the two paths where the original stable epithelial attractor collides with two saddle points sequentially with increased TGF-β concentration, and relaxes to a new one. Functionally, the directional saddle-node bifurcation ensures a CPT proceeds towards a specific cell type, as a mechanistic realization of the canalization idea proposed by Waddington.

Funder

National Institute of Diabetes and Digestive and Kidney Diseases

National Cancer Institute

National Institutes of Health

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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