The giant mimivirus 1.2 Mb genome is elegantly organized into a 30-nm diameter helical protein shield

Author:

Villalta Alejandro1ORCID,Schmitt Alain1ORCID,Estrozi Leandro F2,Quemin Emmanuelle RJ3,Alempic Jean-Marie1,Lartigue Audrey1,Pražák Vojtěch34ORCID,Belmudes Lucid5,Vasishtan Daven34,Colmant Agathe MG1ORCID,Honoré Flora A1ORCID,Couté Yohann5ORCID,Grünewald Kay34,Abergel Chantal1ORCID

Affiliation:

1. Aix–Marseille University, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256 (Institut de Microbiologie de la Méditerranée, FR3479, IM2B)

2. Univ. Grenoble Alpes, CNRS, CEA, Institut de Biologie Structurale (IBS)

3. Centre for Structural Systems Biology, Leibniz Institute for Experimental Virology (HPI), University of Hamburg

4. Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford

5. Univ. Grenoble Alpes, CEA, INSERM, IRIG, BGE

Abstract

Mimivirus is the prototype of the Mimiviridae family of giant dsDNA viruses. Little is known about the organization of the 1.2 Mb genome inside the membrane-limited nucleoid filling the ~0.5 µm icosahedral capsids. Cryo-electron microscopy, cryo-electron tomography, and proteomics revealed that it is encased into a ~30-nm diameter helical protein shell surprisingly composed of two GMC-type oxidoreductases, which also form the glycosylated fibrils decorating the capsid. The genome is arranged in 5- or 6-start left-handed super-helices, with each DNA-strand lining the central channel. This luminal channel of the nucleoprotein fiber is wide enough to accommodate oxidative stress proteins and RNA polymerase subunits identified by proteomics. Such elegant supramolecular organization would represent a remarkable evolutionary strategy for packaging and protecting the genome, in a state ready for immediate transcription upon unwinding in the host cytoplasm. The parsimonious use of the same protein in two unrelated substructures of the virion is unexpected for a giant virus with thousand genes at its disposal.

Funder

European Research Council

Agence Nationale de la Recherche

Wellcome Trust

Deutsche Forschungsgemeinschaft

Alexander von Humboldt-Stiftung

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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