Refinement of AlphaFold2 Models against Experimental Cryo-EM Density Maps at 4-6Å Resolution
Author:
Affiliation:
1. Old Dominion University,Department of Computer Science,Norfolk,VA
2. Old Dominion University,Department of Mechanical and Aerospace Engineering,Norfolk,VA
Publisher
IEEE
Link
http://xplorestaging.ieee.org/ielx7/9994793/9994847/09995676.pdf?arnumber=9995676
Reference31 articles.
1. Critical assessment of methods of protein structure prediction (CASP)—Round XIV
2. Applying and improving AlphaFold at CASP14
3. Improving AlphaFold modeling using implicit information from experimental density maps;Terwilliger;bioRxiv,2022
4. Refinement of AlphaFold2 models against experimental and hybrid cryo-EM density maps
5. Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
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1. Review and Comparative Analysis of Methods and Advancements in Predicting Protein Complex Structure;Interdisciplinary Sciences: Computational Life Sciences;2024-06
2. AlphaFold2 Model Refinement Using Structure Decoys;Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics;2023-09-03
3. Novel Artificial Intelligence-Based Approaches for Ab Initio Structure Determination and Atomic Model Building for Cryo-Electron Microscopy;Micromachines;2023-08-27
4. Appraisal of AlphaFold2-Predicted Models in Cryo-EM Map Interpretation;Microscopy and Microanalysis;2023-07-22
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