Porting and Optimizing BWA-MEM2 Using the Fujitsu A64FX Processor
Author:
Affiliation:
1. Barcelona Supercomputing Center, Barcelona, Spain
2. Departamento de Informática e Ingeniería de Sistemas, Universidad de Zaragoza, María de Luna 1, Zaragoza, Spain
Publisher
Institute of Electrical and Electronics Engineers (IEEE)
Subject
Applied Mathematics,Genetics,Biotechnology
Link
http://xplorestaging.ieee.org/ielx7/8857/4359833/10093071.pdf?arnumber=10093071
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1. Fast and accurate long-read alignment with Burrows–Wheeler transform
2. Fast and accurate short read alignment with Burrows-Wheeler transform
3. Minimap2: pairwise alignment for nucleotide sequences
4. Efficient Architecture-Aware Acceleration of BWA-MEM for Multicore Systems
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