Fast and accurate short read alignment with Burrows-Wheeler transform-Reference-Cited by-同舟云学术

Fast and accurate short read alignment with Burrows-Wheeler transform

Published:2009-05-18 Issue:14 Volume:25 Page:1754-1760
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:Bioinformatics

Author:

Li H.,Durbin R.

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/25/14/1754/605544/btp324.pdf

Reference14 articles.

1. PASS: a program to align short sequences

2. MOM: maximum oligonucleotide mapping

3. A Space and Time Efficient Algorithm for Constructing Compressed Suffix Arrays

4. SeqMap: mapping massive amount of oligonucleotides to the genome

5. ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches

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