Anatomical Structures, Cell Types, and Biomarkers Tables Plus 3D Reference Organs in Support of a Human Reference Atlas-Reference-Cited by-同舟云学术

Anatomical Structures, Cell Types, and Biomarkers Tables Plus 3D Reference Organs in Support of a Human Reference Atlas

Published:2021-06-01 Issue: Volume: Page:
ISSN:
Container-title:
language:
Short-container-title:

Author:

Borner Katy^ORCID,Teichmann Sarah A.^ORCID,Quardokus Ellen M.^ORCID,Gee James^ORCID,Browne Kristen^ORCID,Osumi-Sutherland David^ORCID,Herr Bruce W.^ORCID,Bueckle Andreas^ORCID,Paul Hrishikesh^ORCID,Haniffa Muzlifah A.^ORCID,Jardine Laura^ORCID,Bernard Amy^ORCID,Ding Song-Lin^ORCID,Miller Jeremy A.^ORCID,Lin Shin^ORCID,Halushka Marc^ORCID,Boppana Avinash^ORCID,Longacre Teri A.^ORCID,Hickey John^ORCID,Lin Yiing^ORCID,Valerius M. Todd^ORCID,He Yongqun^ORCID,Pryhuber Gloria^ORCID,Sun Xin^ORCID,Jorgensen Marda^ORCID,Radtke Andrea^ORCID,Wasserfall Clive^ORCID,Ginty Fiona^ORCID,Ho Jonhan^ORCID,Sunshine Joel^ORCID,Beuschel Rebecca T.^ORCID,Brusko Maigan^ORCID,Lee Sujin^ORCID,Malhotra Rajeev^ORCID,Jain Sanjay^ORCID,Weber Griffin^ORCID

Abstract

This paper reviews efforts across 16 international consortia to construct human anatomical structures, cell types, and biomarkers (ASCT+B) tables and three-dimensional reference organs in support of a Human Reference Atlas. We detail the ontological descriptions and spatial three-dimensional anatomical representations together with user interfaces that support the registration and exploration of human tissue data. Four use cases are presented to demonstrate the utility of ASCT+B tables for advancing biomedical research and improving health.

Publisher

Cold Spring Harbor Laboratory

Reference142 articles.

1. Initial sequencing and analysis of the human genome

2. The Sequence of the Human Genome

3. The Human Cell Atlas

4. The Human Cell Atlas: from vision to reality;Nature,2017

5. Comprehensive cellular‐resolution atlas of the adult human brain

Cited by 7 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. FUSION: A web-based application for in-depth exploration of multi-omics data with brightfield histology;2024-07-14

2. Towards a clinically-based common coordinate framework for the human gut cell atlas: the gut models;BMC Medical Informatics and Decision Making;2023-02-15

3. Towards a Clinically-based Common Coordinate Framework for the Human Gut Cell Atlas - The Gut Models;2022-12-12

4. Robust and generalizable segmentation of human functional tissue units;2021-11-11

5. Toward a unified information framework for cell atlas assembly;National Science Review;2021-09-27