The human secretome – the proteins secreted from human cells

Author:

Uhlen MathiasORCID,Tegel Hanna,Sivertsson Åsa,Kuo Chih-Chung,Gutierrez Jahir M.,Lewis Nathan E.,Forsström Björn,Dannemeyer Melanie,Fagerberg Linn,Malm Magdalena,Vunk Helian,Edfors Fredrik,Hober Andreas,Sjöstedt Evelina,Kotol David,Mulder Jan,Mardinoglu Adil,Schwenk Jochen M.,Nilsson Peter,Zwahlen Martin,Takanen Jenny Ottosson,von Feilitzen Kalle,Stadler Charlotte,Lindskog Cecilia,Ponten Fredrik,Nielsen Jens,Palsson Bernhard O.,Volk Anna-Luisa,Lundqvist Magnus,Berling Anna,Svensson Anne-Sophie,Kanje Sara,Enstedt Henric,Afshari Delaram,Ekblad Siri,Scheffel Julia,Katona Borbala,Vuu Jimmy,Lindström Emil,Xu LanLan,Mihai Roxana,Bremer Lucas,Westin Malin,Muse Muna,Mayr Lorenz M.,Knight Sinead,Göpel Sven,Davies Rick,Varley Paul,Hatton Diane,Fields Ray,Voldborg Bjørn G.,Rockberg Johan,Schiavone Lovisa Holmberg,Hober Sophia

Abstract

AbstractThe proteins secreted by human tissues (the secretome) are important for the basic understanding of human biology, but also for identification of potential targets for future diagnosis and therapy. Here, we present an annotation of all predicted secreted proteins (n=2,623) with information about their spatial distribution in the human body. A high-throughput mammalian cell factory was established to create a resource of recombinant full-length proteins. This resource was used for phenotypic assays involving β-cell dedifferentiation and for development of targeted proteomics assays. A comparison between host cells, including omics analysis, shows that many of the proteins that failed to be generated in CHO cells could be rescued in human HEK293 cells. In conclusion, the human secretome has been mapped and characterized to facilitate further exploration of the human secretome.

Publisher

Cold Spring Harbor Laboratory

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