Dependent generalized Dirichlet process priors for the analysis of acute lymphoblastic leukemia

Author:

Barcella William1,De Iorio Maria1,Favaro Stefano2,Rosner Gary L3

Affiliation:

1. Department of Statistical Science, University College London, 1-19 Torrington Place, London WC1E 7HB, UK

2. Department of Economics and Statistics, University of Torino, Corso Unione Sovietica 218/bis, Torino 10134, Italy

3. Oncology Biostatistics and Bioinformatics, Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, 550 N. Broadway, Suite 1103, Baltimore, MD 21205, USA

Abstract

SUMMARY We propose a novel Bayesian nonparametric process prior for modeling a collection of random discrete distributions. This process is defined by including a suitable Beta regression framework within a generalized Dirichlet process to induce dependence among the discrete random distributions. This strategy allows for covariate dependent clustering of the observations. Some advantages of the proposed approach include wide applicability, ease of interpretation, and availability of efficient MCMC algorithms. The motivation for this work is the study of the impact of asparginage metabolism on lipid levels in a group of pediatric patients treated for acute lymphoblastic leukemia.

Funder

European Research Council

Publisher

Oxford University Press (OUP)

Subject

Statistics, Probability and Uncertainty,General Medicine,Statistics and Probability

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