Can we have it all? Repurposing target capture for repeat genomics. A commentary on: ‘Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA’-Reference-Cited by-同舟云学术

Can we have it all? Repurposing target capture for repeat genomics. A commentary on: ‘Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA’

Published:2021-07-21 Issue:7 Volume:128 Page:iii-v
ISSN:0305-7364
Container-title:Annals of Botany
language:en
Short-container-title:

Author:

Heitkam Tony¹^ORCID,Garcia Sònia²^ORCID

Affiliation:

1. Institute of Botany, Technische Universität Dresden, D-o1069 Dresden, Germany

2. Institut Botànic de Barcelona (IBB-CSIC), Passeig del Migdia s/n, 08038 Barcelona, Catalonia, Spain

Abstract

This article comments on: Lucas Costa, André Marques, Chris Buddenhagen, William Wayt Thomas, Bruno Huettel, Veit Schubert, Steven Dodsworth, Andreas Houben, Gustavo Souza and Andrea Pedrosa-Harand, Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA, Annals of Botany, Volume 128, Issue 7, 2 December 2021, Pages 835–848 https://doi.org/10.1093/aob/mcab063

Publisher

Oxford University Press (OUP)

Subject

Plant Science

Link

https://academic.oup.com/aob/article-pdf/128/7/iii/41113066/mcab080.pdf

Reference10 articles.

1. Summarizing and correcting the GC content bias in high-throughput sequencing;Benjamini;Nucleic Acids Research,2012

2. Repetitive DNA in eukaryotic genomes;Biscotti;Chromosome Research,2015

3. Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNA;Costa;Annals of Botany,2021

4. Comparative analysis of repetitive sequences among species from the potato and the tomato clades;Gaiero;Annals of Botany,2019

5. A universal probe set for targeted sequencing of 353 nuclear genes from any flowering plant designed using k-medoids clustering;Johnson;Systematic Biology,2018