PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species
Author:
Affiliation:
1. J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA
Publisher
Oxford University Press (OUP)
Subject
Genetics
Link
http://academic.oup.com/nar/article-pdf/40/22/e172/25347099/gks757.pdf
Reference26 articles.
1. Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial “pan-genome”;Tettelin;Proc. Natl Acad. Sci. USA,2005
2. Comparative genomics: the bacterial pan-genome;Tettelin;Curr. Opin. Microbiol.,2008
3. Distinguishing homologous from analogous proteins;Fitch;Syst. Zool.,1970
4. The quest for orthologs: finding the corresponding gene across genomes;Kuzniar;Trends Genet.,2008
5. Computational methods for Gene Orthology inference;Kristensen;Brief. Bioinform.,2011
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