Unusual weak and delayed GTPase activity of FtsZ from human pathogenic bacteria Helicobacter pylori

Author:

Gurung Sumiran Kumar12,Sangeeta  3,Dubey Priyanka1,Akhtar Fatima1,Saha Abhik14,Bhattacherjee Arnab3,Dhar Suman Kumar1

Affiliation:

1. Jawaharlal Nehru University Special Center for Molecular Medicine, , New Delhi India

2. The University of Alabama Department of Chemical and Biological Engineering, , Tuscaloosa, AL, USA

3. Jawaharlal Nehru University School of Computational and Integrative Sciences, , New Delhi, India

4. University of Kansas Medical Center Department of Pathology & Laboratory Medicine, , Kansas City, KS, USA

Abstract

Abstract Actively treadmilling FtsZ acts as the pivotal scaffold for bacterial cell divisome components, providing them with a circumferential ride along the site of future division. FtsZ from slow-growing Helicobacter pylori (HpFtsZ), a class I carcinogen that thrives abundantly in the acidic environment, is poorly understood. We studied HpFtsZ as a function of pH, cations and time and compared it with well-studied Escherichia coli FtsZ (EcFtsZ). HpFtsZ shows pH-dependent GTPase activity, which is inhibited under acidic conditions. Mg+2 ions play an indispensable role in its GTPase activity; however, higher Mg+2 levels negatively affect its activity. As compared to EcFtsZ, HpFtsZ exhibits lower and slower nucleotide hydrolysing activity. Molecular dynamics simulation studies of FtsZ reveal that GTP binding induces a rewiring of the hydrogen bond network, which results in reduction of the binding cleft volume leading to the spontaneous release of GTP. The GTPase activity is linked to the extent of reduction in the binding cleft volume, which is also supported by the binding free energy analysis. Evidently, HpFtsZ is a pH-sensitive GTPase with low efficiency that may reflect on the overall slow growth rate of H. pylori.

Funder

Bose fellowship

DST SERB, India

Department of Science and Technology Science & Engineering Research Board

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Biochemistry,General Medicine

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