Effects of gene choice, base composition and rate heterogeneity on inference and estimates of divergence times in cypriniform fishes

Author:

Hirt M. Vincent12,Arratia Gloria3,Chen Wei-Jen4,Mayden Richard L.5,Tang Kevin L.6,Wood Robert M.5,Simons Andrew M.27

Affiliation:

1. University of Minnesota, Ecology, Evolution, and Behavior Graduate Program, St. Paul, MN 55108, USA

2. University of Minnesota, Bell Museum of Natural History, Minneapolis, MN 55455, USA

3. Biodiversity Research Center, University of Kansas, Lawrence, KS 66045, USA

4. National Taiwan University, Institute of Oceanography, Taipei 10617, Taiwan

5. Department of Biology, Saint Louis University, St. Louis, MO 63103, USA

6. Department of Biology, University of Michigan-Flint, Flint, MI 48502, USA

7. Department of Fisheries, Wildlife, and Conservation Biology, University of Minnesota, St. Paul, MN 55108, USA

Publisher

Oxford University Press (OUP)

Subject

Ecology, Evolution, Behavior and Systematics

Reference86 articles.

1. The RAG-1 exon in the avian order Caprimulgiformes: phylogeny, heterozygosity, and base composition;Barrowclough;Molecular Phylogenetics and Evolution,2006

2. The tree of life and a new classification of bony fishes;Betancur;PLOS Currents Tree of Life,2013

3. Addressing gene tree discordance and non-stationarity to resolve a multi-locus phylogeny of the flatfishes (Teleostei: Pleuronectiformes);Betancur;Systematic Biology,2013

4. Revision of the cyprinids from the Early Oligocene of the Ceské Stredohori Mountains, and the phylogenetic relationships of Protothymallus Laube 1901 (Teleostei, Cyprinidae, Gobioninae);Böhme;Acta Musei Nationalis Pragae, Series B – Historia Naturalis,2007

5. Osteology of Paedocypris, a miniature and highly developmentally truncated fish (Teleostei: Ostariophysi: Cyprinidae);Britz;Journal of Morphology,2009

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