NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries

Author:

Leggett Richard M.,Clavijo Bernardo J.,Clissold Leah,Clark Matthew D.,Caccamo Mario

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference6 articles.

1. Data Processing of Nextera® Mate Pair Reads on Illumina Sequencing Platforms. Technical note;Illumina,2012

2. Fast and accurate short read alignment with Burrows-Wheeler Transform;Li;Bioinformatics,2009

3. Evaluation of a transposase protocol for rapid generation of shotgun high-throughput sequencing libraries from nanogram quantities of DNA;Marine;Appl. Environ. Microbiol.,2011

4. An improved approach to mate-paired library preparation for Illumina sequencing;Park;Methods Next Gener. Seq.,2013

5. ABySS: a parallel assembler for short read sequence data;Simpson;Genome Res.,2009

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