CANDI: an R package and Shiny app for annotating radiographs and evaluating computer-aided diagnosis

Author:

Badgeley Marcus A123ORCID,Liu Manway3,Glicksberg Benjamin S4,Shervey Mark12,Zech John5,Shameer Khader6,Lehar Joseph7,Oermann Eric K8,McConnell Michael V39,Snyder Thomas M3,Dudley Joel T12

Affiliation:

1. Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA

2. Institute for Next Generation Healthcare, Icahn School of Medicine at Mount Sinai, New York, NY, USA

3. Verily Life Sciences LLC, South San Francisco, CA, USA

4. Institute for Computational Health Sciences, University of California, San Francisco, CA, USA

5. Department of Radiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA

6. Department of Medical Informatics, Northwell Health, Centre for Research Informatics and Innovation, New Hyde Park, NY, USA

7. Department of Bioinformatics, Boston University, Boston, MA, USA

8. Department of Neurological Surgery, Icahn School of Medicine at Mount Sinai, New York, NY, USA

9. Division of Cardiovascular Medicine, Stanford School of Medicine, Stanford, CA, USA

Funder

Verily Life Sciences

LLC

Verily Academic Partnership

Icahn School of Medicine at Mount Sinai

National Institutes of Health

National Center for Advancing Translational Sciences

NCATS

Clinical and Translational Science Award

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference14 articles.

1. EHDViz: clinical dashboard development using open-source technologies;Badgeley,2016

2. Concurrent computer-aided detection improves reading time of digital breast tomosynthesis and maintains interpretation performance in a multireader multicase study;Benedikt;Am. J. Roentgenol,2017

3. Early experiences with crowdsourcing airway annotations in chest CT;Cheplygina;arXiv [cs.CV],2017

4. Preparing a collection of radiology examinations for distribution and retrieval;Demner-Fushman;J. Am. Med. Inform. Assn,2016

5. Influence of computer-aided detection on performance of screening mammography;Fenton;N. Engl. J. Med,2007

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