Identifying differentially methylated sites in samples with varying tumor purity-Reference-Cited by-同舟云学术

Identifying differentially methylated sites in samples with varying tumor purity

Published:2018-04-18 Issue:18 Volume:34 Page:3078-3085
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Häkkinen Antti¹,Alkodsi Amjad¹,Facciotto Chiara¹,Zhang Kaiyang¹,Kaipio Katja²,Leppä Sirpa³,Carpén Olli⁴⁵⁶,Grénman Seija⁷,Hynninen Johanna⁷,Hietanen Sakari⁷,Lehtonen Rainer¹,Hautaniemi Sampsa¹

Affiliation:

1. Research Programs Unit, Genome-Scale Biology, Medicum and Department of Biochemistry and Developmental Biology, Faculty of Medicine, University of Helsinki, Helsinki, Finland

2. Department of Pathology and Forensic Medicine, Institute of Biomedicine, University of Turku, Turku, Finland

3. Department of Oncology, Helsinki University Central Hospital, Helsinki, Finland

4. Department of Pathology, Medicum, University of Helsinki and HUSLAB, Helsinki University Hospital, Helsinki, Finland

5. Research Programs Unit, Genome-Scale Biology, Faculty of Medicine, University of Helsinki, Helsinki, Finland

6. Department of Pathology, Institute of Biomedicine, University of Turku and Turku University Hospital, Turku, Finland

7. Department of Obstetrics and Gynecology, University of Turku and Turku University Hospital, Turku, Finland

Funder

Academy of Finland

European Union’s Horizon 2020 research and innovation programme

Finnish Cancer Organizations

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/34/18/3078/25731813/bty310.pdf

Reference33 articles.

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2. Systematic pan-cancer analysis of tumour purity;Aran;Nat. Commun,2015

3. Comprehensive analysis of DNA methylation data with RnBeads;Assenov;Nat. Methods,2014

4. Controlling the false discovery rate: a practical and powerful approach to multiple testing;Benjamini;J. R. Stat. Soc. B,1995

5. The changing view of high-grade serous ovarian cancer;Berns;Cancer Res,2012

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