emMAW: computing minimal absent words in external memory-Reference-Cited by-同舟云学术

emMAW: computing minimal absent words in external memory

Published:2017-04-12 Issue:17 Volume:33 Page:2746-2749
ISSN:1367-4803
Container-title:Bioinformatics
language:en
Short-container-title:

Author:

Héliou Alice¹,Pissis Solon P²,Puglisi Simon J³

Affiliation:

1. LIX, École Polytechnique, CNRS, INRIA, Université Paris-Saclay, Palaiseau, France

2. Department of Informatics, King’s College London, London, UK

3. Department of Computer Science, University of Helsinki, Helsinki, Finland

Funder

Academy of Finland

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Link

http://academic.oup.com/bioinformatics/article-pdf/33/17/2746/25163927/btx209.pdf

Reference14 articles.

1. On avoided words, absent words, and their application to biological sequence analysis;Almirantis;Algorithms for Molecular Biology,2017

2. Linear-time computation of minimal absent words using suffix array;Barton;BMC Bioinformatics,2014

3. Forbidden words in symbolic dynamics;Béal;Advances in Applied Mathematics,2000

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