Using Genotype Abundance to Improve Phylogenetic Inference-Reference-Cited by-同舟云学术

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Using Genotype Abundance to Improve Phylogenetic Inference

Published:2018-02-20 Issue:5 Volume:35 Page:1253-1265
ISSN:0737-4038
Container-title:Molecular Biology and Evolution
language:en
Short-container-title:

Author:

DeWitt William S¹²^ORCID,Mesin Luka³,Victora Gabriel D³,Minin Vladimir N⁴,Matsen Frederick A¹

Affiliation:

1. Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, WA

2. Department of Genome Sciences, University of Washington, Seattle, WA

3. Laboratory of Lymphocyte Dynamics, The Rockefeller University, New York, NY

4. Department of Statistics, University of California, Irvine, CA

Funder

National Institutes of Health

National Human Genome Research Institute

National Science Foundation

Publisher

Oxford University Press (OUP)

Subject

Genetics,Molecular Biology,Ecology, Evolution, Behavior and Systematics

Link

http://academic.oup.com/mbe/article-pdf/35/5/1253/25091561/msy020.pdf

Reference47 articles.

1. IgTree (c): creating immunoglobulin variable region gene lineage trees;Barak;J Immunol Methods,2008

2. The structure of the allelic partition of the total population for Galton–Watson processes with neutral mutations;Bertoin;Ann Probab,2009

3. Challenges with using primer IDs to improve accuracy of next generation sequencing;Brodin;PLoS One,2015

4. Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing;Cusanovich;Science,2015

5. A public database of memory and naive B-cell receptor sequences;DeWitt;PLoS One,2016

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