Deep learning for the PSIPRED Protein Analysis Workbench-Reference-Cited by-同舟云学术

Deep learning for the PSIPRED Protein Analysis Workbench

Published:2024-05-15 Issue:W1 Volume:52 Page:W287-W293
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Buchan Daniel W A¹^ORCID,Moffat Lewis¹,Lau Andy¹,Kandathil Shaun M¹^ORCID,Jones David T¹

Affiliation:

1. UCL Bioinformatics Group, Department of Computer Science, University College London , London , WC1E 6BT, UK

Abstract

Abstract The PSIRED Workbench is a long established and popular bioinformatics web service offering a wide range of machine learning based analyses for characterizing protein structure and function. In this paper we provide an update of the recent additions and developments to the webserver, with a focus on new Deep Learning based methods. We briefly discuss some trends in server usage since the publication of AlphaFold2 and we give an overview of some upcoming developments for the service. The PSIPRED Workbench is available at http://bioinf.cs.ucl.ac.uk/psipred.

Funder

BBSRC

Publisher

Oxford University Press (OUP)

Link

https://academic.oup.com/nar/article-pdf/52/W1/W287/58436290/gkae328.pdf

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