AI-based forecasting of ethanol fermentation using yeast morphological data

Author:

Itto-Nakama Kaori1ORCID,Watanabe Shun2,Kondo Naoko1,Ohnuki Shinsuke1ORCID,Kikuchi Ryota23,Nakamura Toru4,Ogasawara Wataru5,Kasahara Ken2,Ohya Yoshikazu16ORCID

Affiliation:

1. Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, Japan

2. Chitose Laboratory Corp., Biotechnology Research Center, Miyamae-ku, Kawasaki, Kanagawa, Japan

3. Circular Bioeconomy Development, Office of Society Academia Collaboration for Innovation, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto, Japan

4. NRI System Techno Ltd., Hodogaya-ku, Yokohama, Kanagawa, Japan

5. Department of Bioengineering, Nagaoka University of Technology, Nagaoka, Niigata, Japan

6. Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Bunkyo-ku, Tokyo, Japan

Abstract

ABSTRACT Several industries require getting information of products as soon as possible during fermentation. However, the trade-off between sensing speed and data quantity presents challenges for forecasting fermentation product yields. In this study, we tried to develop AI models to forecast ethanol yields in yeast fermentation cultures, using cell morphological data. Our platform involves the quick acquisition of yeast morphological images using a nonstaining protocol, extraction of high-dimensional morphological data using image processing software, and forecasting of ethanol yields via supervised machine learning. We found that the neural network algorithm produced the best performance, which had a coefficient of determination of >0.9 even at 30 and 60 min in the future. The model was validated using test data collected using the CalMorph-PC(10) system, which enables rapid image acquisition within 10 min. AI-based forecasting of product yields based on cell morphology will facilitate the management and stable production of desired biocommodities.

Funder

New Energy and Industrial Technology Development Organization

Publisher

Oxford University Press (OUP)

Subject

Organic Chemistry,Molecular Biology,Applied Microbiology and Biotechnology,General Medicine,Biochemistry,Analytical Chemistry,Biotechnology

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