Workflow and web application for annotating NCBI BioProject transcriptome data-Reference-Cited by-同舟云学术

Workflow and web application for annotating NCBI BioProject transcriptome data

Published:2017-01-01 Issue: Volume:2017 Page:
ISSN:1758-0463
Container-title:Database
language:en
Short-container-title:

Author:

Vera Alvarez Roberto¹,Medeiros Vidal Newton¹,Garzón-Martínez Gina A.²,Barrero Luz S.²,Landsman David¹,Mariño-Ramírez Leonardo¹

Affiliation:

1. Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 8600 Rockville Pike. Bethesda, MD 20894, USA

2. Colombian Corporation for Agricultural Research (CORPOICA), Km 14 vía Mosquera, Bogota, Colombia

Funder

U.S. National Library of Medicine

Publisher

Oxford University Press (OUP)

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,Information Systems

Link

http://academic.oup.com/database/article-pdf/doi/10.1093/database/bax008/19230574/bax008.pdf

Reference33 articles.

1. Next-generation DNA sequencing;Shendure;Nature Biotechnol,2008

2. RNA-Seq: a revolutionary tool for transcriptomics;Wang;Nat. Rev. Genet,2009

3. Enhancing structural annotation of yeast genomes with RNA-Seq data;Devillers;Methods Mol. Biol,2016

4. Whole transcriptome expression profiling of mouse limb tendon development by using RNA-seq;Liu;J. Orthop. Res,2015

5. Whole transcriptome analysis provides insights into molecular mechanisms for molting in Litopenaeus vannamei;Gao;PloS One,2015

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