jMorp: Japanese Multi-Omics Reference Panel update report 2023

Author:

Tadaka Shu1ORCID,Kawashima Junko1,Hishinuma Eiji12,Saito Sakae12,Okamura Yasunobu12,Otsuki Akihito13,Kojima Kaname1,Komaki Shohei4,Aoki Yuichi15ORCID,Kanno Takanari1,Saigusa Daisuke16,Inoue Jin12,Shirota Matsuyuki13,Takayama Jun1237,Katsuoka Fumiki12,Shimizu Atsushi14,Tamiya Gen1237,Shimizu Ritsuko123,Hiratsuka Masahiro128,Motoike Ikuko N15,Koshiba Seizo12,Sasaki Makoto4,Yamamoto Masayuki12,Kinoshita Kengo125ORCID

Affiliation:

1. Tohoku Medical Megabank Organization, Tohoku University , Sendai , Miyagi  980-8573 , Japan

2. Advanced Research Center for Innovations in Next-Generation Medicine, Tohoku University , Sendai , Miyagi  980-8573 , Japan

3. Graduate School of Medicine, Tohoku University , Sendai , Miyagi  980-8575 , Japan

4. Iwate Tohoku Medical Megabank Organization, Iwate Medical University , Shiwa-gun , Iwate  028-3609 , Japan

5. Graduate School of Information Sciences, Tohoku University , Sendai , Miyagi  980-8579 , Japan

6. Faculty of Pharma-Science, Teikyo University , Tokyo  173-8605 , Japan

7. RIKEN Center for Advanced Intelligence Project , Tokyo  103-0027 , Japan

8. Graduate School of Pharmaceutical Sciences, Tohoku University , Sendai , Miyagi  980-8578 , Japan

Abstract

Abstract Modern medicine is increasingly focused on personalized medicine, and multi-omics data is crucial in understanding biological phenomena and disease mechanisms. Each ethnic group has its unique genetic background with specific genomic variations influencing disease risk and drug response. Therefore, multi-omics data from specific ethnic populations are essential for the effective implementation of personalized medicine. Various prospective cohort studies, such as the UK Biobank, All of Us and Lifelines, have been conducted worldwide. The Tohoku Medical Megabank project was initiated after the Great East Japan Earthquake in 2011. It collects biological specimens and conducts genome and omics analyses to build a basis for personalized medicine. Summary statistical data from these analyses are available in the jMorp web database (https://jmorp.megabank.tohoku.ac.jp), which provides a multidimensional approach to the diversity of the Japanese population. jMorp was launched in 2015 as a public database for plasma metabolome and proteome analyses and has been continuously updated. The current update will significantly expand the scale of the data (metabolome, genome, transcriptome, and metagenome). In addition, the user interface and backend server implementations were rewritten to improve the connectivity between the items stored in jMorp. This paper provides an overview of the new version of the jMorp.

Funder

Japan Agency for Medical Research and Development

ToMMo supercomputer system, which is supported by AMED

Publisher

Oxford University Press (OUP)

Subject

Genetics

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